Literature DB >> 31688998

Algorithmic Clustering Of Single-Cell Cytometry Data-How Unsupervised Are These Analyses Really?

Christina Bligaard Pedersen1,2, Lars Rønn Olsen1,2.   

Abstract

Keywords:  bioinformatics; clustering; immunophenotyping; visualization

Mesh：

Year:  2019        PMID： 31688998     DOI： 10.1002/cyto.a.23917

Source DB:  PubMed          Journal:  Cytometry A        ISSN： 1552-4922            Impact factor:   4.355


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  5 in total

Review 1.  Analyzing high-dimensional cytometry data using FlowSOM.

Authors:  Katrien Quintelier; Artuur Couckuyt; Annelies Emmaneel; Joachim Aerts; Yvan Saeys; Sofie Van Gassen
Journal:  Nat Protoc       Date:  2021-06-25       Impact factor: 13.491

2.  cyCombine allows for robust integration of single-cell cytometry datasets within and across technologies.

Authors:  Christina Bligaard Pedersen; Søren Helweg Dam; Mike Bogetofte Barnkob; Michael D Leipold; Noelia Purroy; Laura Z Rassenti; Thomas J Kipps; Jennifer Nguyen; James Arthur Lederer; Satyen Harish Gohil; Catherine J Wu; Lars Rønn Olsen
Journal:  Nat Commun       Date:  2022-03-31       Impact factor: 14.919

3.  Novel approach to analysis of the immune system using an ungated model of immune surface marker abundance to predict health outcomes.

Authors:  G Provost; F B Lavoie; A Larbi; T P Ng; C Tan Tze Ying; M Chua; T Fulop; A A Cohen
Journal:  Immun Ageing       Date:  2022-08-04       Impact factor: 9.701

4.  Adoptive cell therapy in combination with checkpoint inhibitors in ovarian cancer.

Authors:  Anders Handrup Kverneland; Magnus Pedersen; Marie Christine Wulff Westergaard; Morten Nielsen; Troels Holz Borch; Lars Rønn Olsen; Gitte Aasbjerg; Saskia J Santegoets; Sjoerd H van der Burg; Katy Milne; Brad H Nelson; Özcan Met; Marco Donia; Inge Marie Svane
Journal:  Oncotarget       Date:  2020-06-02

5.  Method for the Analysis of the Tumor Microenvironment by Mass Cytometry: Application to Chronic Lymphocytic Leukemia.

Authors:  Susanne Gonder; Iria Fernandez Botana; Marina Wierz; Giulia Pagano; Ernesto Gargiulo; Antonio Cosma; Etienne Moussay; Jerome Paggetti; Anne Largeot
Journal:  Front Immunol       Date:  2020-10-20       Impact factor: 7.561
  5 in total

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