Literature DB >> 31686356

Backbone and side chain 1H, 15N and 13C chemical shift assignments of the molten globule state of L94G mutant of horse cytochrome-c.

Abdullah Naiyer1, Asimul Islam1, Md Imtaiyaz Hassan1, Faizan Ahmad2, Monica Sundd3.   

Abstract

Proteins fold via a number of intermediates that help them to attain their unique native 3D structure. These intermediates can be trapped under extreme conditions of pH, temperature and chemical denaturants. Similar states can also be achieved by other processes like chemical modification, site directed mutagenesis (or point mutation) and cleavage of covalent bonds of natural proteins under physiological conditions usually taken as dilute buffer (near neutral pH) and 25 °C. Structural characterization of molten globules is hampered due to (i) their transient nature, (ii) very low population at equilibrium, and (iii) prone to aggregation at high concentration. Furthermore, the dynamic nature of these folding intermediates makes them unsuitable for X-ray diffraction. Hence, understanding their structures at the atomic level is often a challenge. However, characterization of these intermediates at the atomic level is possible by NMR, which could possibly unravel new details of the protein folding process. We have previously shown that the L94G mutant of horse cytochrome-c displays characteristics of the molten globule (MG) state at pH 6.0 and 25 °C. As a first step towards characterizing this MG state at the atomic level by NMR, we report its complete backbone, side chain and heme chemical shift assignments.

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Keywords:  Chemical shift assignments; Cytochrome-c; Molten globule; Nuclear magnetic resonance; Protein folding

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Year:  2019        PMID: 31686356     DOI: 10.1007/s12104-019-09917-7

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  1 in total

1.  Stability of uniformly labeled (13C and 15N) cytochrome c and its L94G mutant.

Authors:  Abdullah Naiyer; Bushra Khan; Afzal Hussain; Asimul Islam; Mohamed F Alajmi; Md Imtaiyaz Hassan; Monica Sundd; Faizan Ahmad
Journal:  Sci Rep       Date:  2021-03-24       Impact factor: 4.379

  1 in total

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