Literature DB >> 31681889

Molecular Understanding of Solvents and Glycitein Interaction during Extraction.

Hailiang Zhao1, Xue Song1, Yingming Zhang1, Xia Sheng1, Keren Gu1.   

Abstract

Hydrogen bonding interaction plays a crucial role in liquid systems. Methanol, ethanol, and acetone are the most commonly used solvents to extract isoflavones from soybeans. The structural and electronic properties of the molecular clusters of naturally occurring glycitein with solvents were investigated using the density functional theory method employing the B3LYP-D3/cc-pVTZ approach. The influence of the solvent was carried out by using the polarized continuum model (PCM). The geometry optimization, vibrational frequencies, and topological parameters have been assessed at the same level of theory. From the molecular structure and thermodynamic point of view, the most stable structures are formed by the interaction between the carbonyl group of glycitein and MeOH or EtOH. For acetone-glycitein, the strongest interaction is formed by the interaction of the hydroxyl group of glycitein with the carbonyl group of acetone. All the hydrogen bonds in the MeOH/EtOH/acetone-glycitein complexes are closed-shell interactions. This study can help increase the efficiency of extraction.
Copyright © 2019 American Chemical Society.

Entities:  

Year:  2019        PMID: 31681889      PMCID: PMC6822119          DOI: 10.1021/acsomega.9b02464

Source DB:  PubMed          Journal:  ACS Omega        ISSN: 2470-1343


Introduction

Soybeans contain a wide range of isoflavones, such as daidzein, glycitein, genistein, and so forth. Soy isoflavones are naturally occurring polyphenol compounds and structurally similar to estradiol. Soybeans contain 3 mg g–1 (dry weight) of isoflavones.[1] Meanwhile, isoflavones are similar to the antioxidant flavonoids that are found in other vegetables, plants, and flowers. Among all the soy isoflavones, genistein and daidzein are the major portions of isoflavones in soybeans. Daidzein and genistein from soybeans are a source of phytoestrogens for humans. On the other hand, most of the natural estrogenic substances show weak activities. As a result, they have been widely investigated for their important health-enhancing properties such as prevention of sex hormone-dependent cancer, improvement of bone health, and so forth.[2] For instance, genistein has many health benefits as an antioxidant, inhibitor to regulate cell divisions and cells survival, antiangiogenetic agent, and so forth.[3,4] Their estrogenic activities have been demonstrated to bind to estrogen receptors from different animals, such as mice, rats, sheep, and so forth.[5] Meanwhile, glycitein (C16H12O5, 7,4′-dihydroxy-6-methoxyisoflavone) is about 5–10% of the total soy isoflavones.[6] Thus, it is essential to assess the chemical and physical activity of glycitein. One of the studies showed that glycitein is much weaker in estrogenic activity than other soy isoflavones.[1] In contrast, glycitein actually has a stronger estrogenic response on an equal amount basis in the mice uterine enlargement assay.[7] However, there are a variety of impurities in soy which can influence the quality of the isoflavones during production. Therefore, removal of the impurities below the acceptable level is required. One of the commonly employed separation method is extraction, and isoflavones are normally extracted from foods with methanol, ethanol, acetonitrile, and so forth.[8−10] The extraction can be carried out either at room temperature or above.[11] Meanwhile, hydrogen bonding interactions between solute and polar organic solvents play a crucial role in the extraction reaction.[12] However, few studies have been focused on the extraction mechanism. Density functional theory (DFT) calculations are one of the effective methods to obtain the conformation, electronic structures, and inter/intramolecular interactions of isoflavones, such as daidzein, genistein, and so forth.[13,14] On the other hand, the intermolecular interaction in solvents, namely, hydrogen bonding interaction, has a great influence on the extraction process.[15] The main aim of this study is to calculate the hydrogen bonding interaction between glycitein and methanol (MeOH), ethanol (EtOH), or acetone in the extraction reaction from a theoretical point of view.

Results and Discussion

Conformational Analysis

The framework and atom numbering of glycitein are presented in Figure . There are two phenyl rings (I and III) and one heterocyclic ring (II) in glycitein. They contain several functional groups: −OCH3, −OH, and −C=O. The optimization of the glycitein monomer at the B3LYP-D3 DFT functional level converged to eight different conformers when one rotates the −OaCH3, −ObHb, or −OeHe functional groups (Figure ). Then, it can be noticed that all the eight conformers have nonplanar structures, and they can be divided into two groups: Ob–Hb···Oa intramolecular hydrogen bonded structures (Figure , A, B) and non-hydrogen-bonded structures (Figure , C–H). Meanwhile, there is a torsion angle between the II and III rings as seen in Figure . In a previous study, the conformational absolute minimum of glycitein by rotating the II and III rings was found with a torsion angle of 40° (B3LYP/6-311G(d,p)).[16] In this study, the torsion angles were calculated to be 40.9°–41.9° for all eight conformers. As a result, the coplanarity between the II and III rings is lost, whereas the coplanarity remains between the I and II rings. In the most stable conformers [glycitein (A) and glycitein (B), Figure ], the hydroxyl group Ob–Hb interacts with the Oa carbonyl atom to form an intramolecular hydrogen bond. This makes the glycitein (A) and glycitein (B) conformers at least ∼19 kJ mol–1 more stable than the non-hydrogen-bonded conformers. Meanwhile, the geometric difference between glycitein (A) and glycitein (B) is the orientation of the −OeHe group. Glycitein (A) is only slightly about 0.8 kJ mol–1 more stable than glycitein (B). In contrast, the rotational barrier between the two conformers is much higher about 14.3 kJ mol–1. However, different orientations of the −OeHe group are unlikely to affect the relative stability of the molecular interaction between glycitein and various solvents in this work, and the strongest interaction is the one between carbonyl oxygen and solvents. Meanwhile, the EtOH monomer has two conformers: a trans-conformer and a gauche-conformer.[17] The gauche-conformer is about 0.3 kJ mol–1 [B3LYP-D3/cc-pVTZ, corrected with zero-point vibrational energy (ZPVE)] more stable than the trans-conformer. Thus, only the most stable glycitein (A) and the gauche-EtOH conformer will be used to study the molecular interaction in this study. The notations “glycitein” and “EtOH” in the following text will refer to glycitein (A) and gauche-EtOH, respectively.
Figure 1

Chemical structure with atom numbering of glycitein.

Figure 2

Eight stable glycitein conformers optimized at the B3LYP-D3/cc-pVTZ level. Relative electronic energies are listed.

Chemical structure with atom numbering of glycitein. Eight stable glycitein conformers optimized at the B3LYP-D3/cc-pVTZ level. Relative electronic energies are listed. Glycitein interacts with solvents (such as MeOH, EtOH, and acetone) during extraction as either a hydrogen bond acceptor or a hydrogen bond donor. When it acts as a hydrogen bond acceptor, there are five different docking sites for the hydrogen atom of MeOH, that is, Oa, Ob, Oc, Od, and Oe (Figure ). The labels of hydrogen, carbon, and oxygen atoms are in white, gray, and red colors, respectively. The Ob atom together with the Oe atom belongs to the hydroxyl groups of the glycitein molecule. The Ob and Od atoms, on the other hand, belong to an ether group while Oc is derived from a carbonyl group. As a hydrogen bond donor, the two hydroxyl groups, −ObHb, and −OeHe, can donate their hydrogen atoms to a hydrogen bond acceptor, such as acetone. The most stable structures of the MeOHglycitein complexes at the B3LYP-D3/cc-pVTZ level are presented in Figure . The MeOH molecule acts as a hydrogen bond donor and acceptor in MeOHglycitein (A). MeOH is the hydrogen bond donor approaching to glycitein in MeOHglycitein (B–E), while MeOH is the hydrogen bond acceptor in MeOHglycitein (F). The binding energy (BE) is one of the most effective indicators to reveal the relative stability of a structure. BE of a stable interacted complex is often negative. The lower BE means a stronger molecular interaction. Meanwhile, ZPVEs are quite large about 4.6–6.6 kJ mol–1 for the studied systems, and basis set superposition errors (BSSEs) vary from 6.8 to 9.9 kJ mol–1 (Table S1, Supporting Information). The binding energies in Figure were calculated at ambient conditions (298.15 K and 1 atm) at the B3LYP-D3/cc-pVTZ level and corrected with ZPVE and BSSE. Based on the binding energies, the strength as a hydrogen bond acceptor can be sorted as Oc > Ob > Oe > Oa > Od. This indicates that the carbonyl oxygen is the best hydrogen bond acceptor, and this is in line with previous studies: (i) the O–H···O=C (carbonyl oxygen) hydrogen bonding interactions are about 9.6–11.0 kJ mol–1 (B3LYP/6-31+G(d)) more favorable than the O–H···O (ester oxygen) hydrogen bonding interaction in the MeOH−α-hydroxyester systems, where α-hydroxyester is methyl glycolate, methyl lactate, or methyl α-hydroxyisobutyrate;[18] (ii) the O–H···O=C (carbonyl oxygen) hydrogen bonding interaction is about 9.7 kJ mol–1 also more stable than the corresponding O–H···O (ester oxygen) hydrogen bonding interaction in the MeOH–methyl lactate system.[19] All these imply that the most favorite docking site for the incoming MeOH is the carbonyl group oxygen Oc.
Figure 3

Six stable MeOH–glycitein molecular clusters optimized at the B3LYP-D3/cc-pVTZ level. BEs (corrected with ZPVE and BSSE) are given in brackets. Hydrogen bonds between MeOH and glycitein are represented by dashed lines. The labels of hydrogen, carbon, and oxygen atoms are in white, gray, and red colors, respectively.

Six stable MeOHglycitein molecular clusters optimized at the B3LYP-D3/cc-pVTZ level. BEs (corrected with ZPVE and BSSE) are given in brackets. Hydrogen bonds between MeOH and glycitein are represented by dashed lines. The labels of hydrogen, carbon, and oxygen atoms are in white, gray, and red colors, respectively. Meanwhile, the strength as a hydrogen bond donor is sorted as OeHe > OaHa. Thus, for the EtOHglycitein and acetoneglycitein systems, only the most stable structures formed between EtOH/acetone and the Oc or OeHe group of glycitein were studied. The most stable structures of the EtOHglycitein and acetoneglycitein complexes at the B3LYP-D3/cc-pVTZ level are presented in Figure . This demonstrates that the driving force for extracting glycitein is the hydrogen bonding interaction between the solvent (a hydrogen bond donor, such as MeOH and EtOH) and carbonyl oxygen Oc of glycitein, or between the solvent (a hydrogen bond acceptor, such as acetone) and the hydroxyl group OeHe of glycitein.
Figure 4

Most stable EtOH–glycitein and acetone–glycitein molecular clusters optimized at the B3LYP-D3/cc-pVTZ level. Binding energies (corrected with ZPVE and BSSE) are given in brackets. Hydrogen bonds between EtOH/acetone and glycitein are represented by dashed lines.

Most stable EtOHglycitein and acetoneglycitein molecular clusters optimized at the B3LYP-D3/cc-pVTZ level. Binding energies (corrected with ZPVE and BSSE) are given in brackets. Hydrogen bonds between EtOH/acetone and glycitein are represented by dashed lines.

Solvent Effects and Their Influence on the Hydrogen Bond

In order to study the effects of solvents on the electronic energies, geometrical parameters, and IR frequencies of the glycitein-containing complexes, the most stable conformers of the MeOHglycitein, EtOHglycitein, and acetoneglycitein structures were fully optimized within the polarizable continuum model (PCM) at the B3LYP-D3/cc-pVTZ level of theory. The calculated geometrical parameters and interaction energies of the most stable conformers of MeOHglycitein, EtOHglycitein, and acetoneglycitein in different solvents are present in Table . The relative permittivity (ε) values of acetone, ethanol, and methanol are 20.493, 24.852, and 32.613, respectively.[20] The structure is stabilized in the solvent, and it is due to immersion in the solvent. The stabilized energy (ΔES) can be calculated as followswhere E(solvent) is the electronic energy in the solvent, and E(gas) is the electronic energy in the gas phase. Meanwhile, the major components of the hydrogen bonding interaction energy are electrostatic and charge-transfer; thus, the effect of the solvent polarity on the hydrogen bond is expected.[21] In this study, the polarity of the solvent plays an important role in extraction, and this is due to the hydroxyl groups of glycitein. MeOHglycitein is stabilized by 38.2 kJ mol–1 (in the MeOH solvent), 37.5 kJ mol–1 (in the EtOH solvent), and 36.8 kJ mol–1 (in the acetone solvent) as compared with the electronic energy in the gas phase, whereas the EtOHglycitein complex is stabilized by 37.4–38.8 kJ mol–1 in the three solvents. In contrast, the acetoneglycitein complex is favored by 44.2–45.7 kJ mol–1 in the three solvents. It should be mentioned that the dipole moments of the three complexes were found to be 1.86, 2.87, and 5.96 D for MeOHglycitein, EtOHglycitein, and acetoneglycitein, respectively, at the B3LYP-D3/cc-pVTZ level of theory (gas phase). To summarize, the PCM model indicates that acetoneglycitein is stabilized more than EtOHglycitein and MeOHglycitein. This is due to the higher dipole moment of the former when the solvent effects of MeOH, EtOH, and acetone solvents were taken into account. For the glycitein-containing complexes, BEs were obtained at −39.1 to −36.2 kJ mol–1 in the gas phase. This is much more stable than some MeOH-containing hydrogen bonded systems (gas phase), where MeOHdimethylamine (DMA), MeOH–trimethylamine (TMA), and MeOH–dimethylether (DME) were obtained to be about −21.2 to −19.7 kJ mol–1 (B3LYP/aug-cc-pVTZ).[22,23] Meanwhile, BEs were calculated to be −34.6 to −32.7 kJ mol–1 in the three solvents. This means that the monomers in the three solvents bind to each other slightly less favored than the monomers in the gas phase bind to each other.
Table 1

Selected Parameters of the Most Stable Glycitein-Containing Complexes Calculated by Applying the B3LYP-D3 Method Using the cc-pVTZ Basis Seta

conformersolventBEΔaΔr(OH)ΔE(H)ρ(BCP)2ρ(BCP)dipole moment
MeOH–glyciteingas–37.22550.0140.0410.0240.1451.86
 acetone–25.22940.0150.0500.0270.1662.80
 MeOH–25.13120.0150.0500.0270.1662.89
 EtOH–24.93110.0150.0500.0270.1662.84
EtOH–glyciteingas–39.12270.0120.0450.0240.1372.87
 acetone–27.82820.0130.0470.0260.1533.40
 MeOH–27.72840.0130.0470.0260.1533.49
 EtOH–27.62830.0130.0470.0260.1533.44
acetone–glyciteingas–36.22980.0150.0510.0250.1435.96
 acetone–28.34240.0200.0610.0280.1775.87
 MeOH–28.24260.0200.0610.0280.1775.88
 EtOH–28.14280.0200.0610.0280.1775.87

BEs are given in kJ mol–1. Δṽ = ṽmonomer – ṽdimer (in cm–1). Δr(OH) = rdimer – rmonomer (in Å), is the change in the OH bond length upon complexation. QTAIM parameters [ΔE(H), ρ(BCP), ∇2ρ(BCP)] are given in au. Dipole moment is given in debye.

BEs are given in kJ mol–1. Δṽ = ṽmonomer – ṽdimer (in cm–1). Δr(OH) = rdimer – rmonomer (in Å), is the change in the OH bond length upon complexation. QTAIM parameters [ΔE(H), ρ(BCP), ∇2ρ(BCP)] are given in au. Dipole moment is given in debye. The OH-stretching vibrational frequencies of MeOH, EtOH, and glycitein monomers are red-shifted (Δṽ = ṽmonomer – ṽdimer) by about 11–20 cm–1 in the three solvents when compared with the values in the gas phase. The corresponding OH bond lengths are increased by 0.001–0.002 Å in the three solvents. Meanwhile, the C=O stretching vibrational frequencies of acetone and glycitein are also red-shifted by 36–56 cm–1 in the solvent, and the C=O bond distances are elongated by 0.006–0.007 Å in the three solvents as well. On the other hand, there is a change in the hydrogen bond length during complexation. Thus, it leads to a red shift between the free and the hydrogen-bonded vibrational transitions. The quantity of red shift is commonly used to justify the relative strength of the hydrogen bonding interaction.[24,25] The B3LYP-D3/cc-pVTZ-calculated red shifts of the OH-stretching fundamental transition upon complexation and the corresponding changes of the OH bond are listed in Table . The red shifts of the OH-stretching vibrational frequencies are 255–298 cm–1 in the gas phase as compared with the monomer (gas phase). The corresponding red shifts are significantly increased to 282–428 cm–1 in the three solvents. This is because the strength of the hydrogen bond dramatically increases in the three solvents. Upon complexation, the changes of the OH bond length of the glycitein-containing complexes vary from 0.012 to 0.020 Å. These are similar with the previous studies in the O–H···O hydrogen bonded system. In the study of the MeOH–DMA and MeOH–TMA complexes (gas phase), the OH bond lengths in the O–H···O hydrogen bonds were calculated to be elongated by 0.016–0.018 Å during complexation.[22] However, the NH bond distances in the N–H···N hydrogen bonds (gas phase) were only increased by 0.003–0.004 Å (QCISD/aug-cc-pVTZ) in DMA–DMA and 0.005 Å [CCSD(T)-F12a/VDZ-F12] in DMA–TMA upon hydrogen bond formation.[25,26] Consequently, comparable red shifts were also found in MeOH-containing complexes (gas phase): MeOH–TMA (333 cm–1, local mode model), MeOH–DME (234 cm–1, B3LYP-D3/aug-cc-pVTZ), and MeOH–DMA (301 cm–1, local mode model).[22,23] The most stable conformers of glycitein and MeOHglycitein in both the gas phase and the MeOH solvent were used to simulate the ultraviolet–visible (UV–vis) absorption spectra. The first 200 singlet → singlet spin-allowed excited states were calculated, and the max absorption wavelengths λmax, the electronic excitation energies, and the oscillator strengths f were obtained using time-dependent (TD)-DFT at the B3LYP-D3/cc-pVTZ level. The simulated 200–350 nm UV–vis spectra are displayed in Figure . The simulated spectra were formed because of the electronic transitions from the highest occupied molecular orbitals (HOMOs) to the lowest unoccupied molecular orbitals (LUMOs). The five important frontier molecular orbitals of glycitein (in the MeOH solvent): HOMO – 2, HOMO – 1, HOMO, LUMO, and LUMO + 1, are illustrated in Figure . It is clear that the five frontier molecular orbitals are the π and π* molecular orbitals locating at the I, II, and III rings of glycitein (in the MeOH solvent). One can notice that it is the π → π* transitions taking place in the UV–vis region with high extinction coefficients. The max absorption wavelengths λmax of glycitein were calculated to be 271.63 nm (gas phase) and 270.49 nm (in the MeOH solvent). The max absorption wavelengths λmax of MeOHglycitein were calculated to be 271.62 nm (gas phase) and 273.54 nm (in the MeOH solvent). Moreover, the experimental UV–vis spectral data for glycitein were λmax 257 nm (in the MeOH solvent).[1] Our calculated λmax is slightly larger than the experimental value, and this may be due to the DFT method used which overestimates the UV–vis spectra. Moreover, our calculations show that the max absorption is mainly formed by three excitations: +0.66(HOMO → LUMO + 1), +0.14(HOMO – 1 → LUMO + 1), and 0.15(HOMO – 1 → LUMO). The interacting site in MeOHglycitein is the carbonyl group of glycitein. The interaction only has a slight effect on the π and π* molecular orbitals located at the I, II, and III rings of glycitein. Thus, the max absorption wavelength is only marginally influenced by the hydrogen bonding interaction.
Figure 5

Simulated UV–vis spectra (200–350 nm) of glycitein and MeOH–glycitein at the B3LYP-D3/cc-pVTZ level.

Figure 6

Molecular orbital surfaces and energy levels at the B3LYP-D3/cc-pVTZ level for the HOMO – 2, HOMO – 1, HOMO, LUMO, and LUMO + 1. Isosurface value is ±0.02 au.

Simulated UV–vis spectra (200–350 nm) of glycitein and MeOHglycitein at the B3LYP-D3/cc-pVTZ level. Molecular orbital surfaces and energy levels at the B3LYP-D3/cc-pVTZ level for the HOMO – 2, HOMO – 1, HOMO, LUMO, and LUMO + 1. Isosurface value is ±0.02 au.

Nature of Hydrogen Bond: Quantum Theory of Atoms in Molecules Analysis

The topological quantum theory of atoms in molecules (QTAIM) was unitized to analyze the chemical bond between two neighboring atoms. Then, the parameters to describe the nature of a chemical bond, such as, bond critical points (BCPs), ring critical points (RCPs), cage critical points (CCPs), electron density ρ(r) and Laplacian ∇2ρ(r) at BCPs, and atomic charge Δq(H) and atomic energy [ΔE(H)] of the hydrogen bond donor atom, were calculated with the AIM2000 program package. The QTAIM topological plots of the most stable MeOHglycitein, EtOHglycitein, and acetoneglycitein conformers with BCPs, RCPs, and electron density paths are displayed in Figure . The corresponding parameters in the gas phase and the solvents are listed in Table . Moreover, the strength of a hydrogen bond can be classified as follows: (a) weak hydrogen bond: ΔE(H) < 0.019 au, ∇2ρ(r) > 0; (b) medium hydrogen bond: 0.019 au < ΔE(H) < 0.038 au, ∇2ρ(r) > 0; and (c) strong hydrogen bond: ΔE(H) > 0.038 au, ∇2ρ(r) < 0.[27]
Figure 7

QTAIM topological plots of the most stable MeOH–glycitein, EtOH–glycitein, and acetone–glycitein conformers (gas phase) obtained at the B3LYP-D3/cc-pVTZ level. The BCPs, RCPs, and CCP are represented by the red, yellow, and green balls, respectively.

QTAIM topological plots of the most stable MeOHglycitein, EtOHglycitein, and acetoneglycitein conformers (gas phase) obtained at the B3LYP-D3/cc-pVTZ level. The BCPs, RCPs, and CCP are represented by the red, yellow, and green balls, respectively. As seen in Table , the Laplacian of total electronic densities, ∇2ρ(r), at BCPs are all positive, 0.137–0.177 au. This indicates that the electronic charges are depleted in the interatomic path. Thus, the hydrogen bonding interactions are classified as closed-shell molecular interactions. According to the abovementioned classification, the O–H···Oc and Oe–He···O hydrogen bonds are strong hydrogen bonds [ΔE(H) = 0.041–0.061 au] in both the solvents and the gas phase. Moreover, the strengths of the studied hydrogen bonds increase in solvents. However, the dielectric constants of the three solvents are very close to each other, so the increase in the strength of the hydrogen bond seems very close in the three solvents as well. For a hydrogen bond, the electron density ρ(BCP) and the Laplacian of charge density ∇2ρ(BCP) at BCPs should be in the range 0.002–0.040 au and 0.014–0.139 au, respectively.[28,29] For the studied systems in Table , ρ(BCP) and ∇2ρ(BCP) were calculated to be in the ranges 0.024–0.028 and 0.137–0.177 au, respectively. However, the ∇2ρ(BCP) values are higher than the upper range of the Laplacian criteria for a hydrogen bond.[28,29] The ∇2ρ(BCP) values for the interactions between benzoic acid/cis-pinonic acid–sulfuric acid were also calculated to be exceeding the upper range of hydrogen bond criteria.[30] This is due to the formation of strong hydrogen bonds. On the other hand, there is also a charge transfer (CT) when a hydrogen-bonded complex is formed, leading to a decreased charge on the hydrogen atom.[31] The quantity of CT reveals a part of the stabilization energy of the hydrogen bonded system, and it determines the electron delocalization interaction between the two interacted systems.[32] This means that the more electron transfer it does, the more stable the system is. In this study, there are about 0.09–0.11 electrons from the hydrogen bond acceptor to the donor. The results of Δq(H) demonstrate that the hydrogen bond strengths in the gas phase are greater than the ones in the solvent.

Concluding Remark

In the present study, DFT has been used to investigate the naturally occurring isoflavonoid compound, glycitein. The hydrogen bonds were analyzed using the B3LYP-D3 level of theory at the cc-pVTZ basis set. The effects of various solvents (methanol, ethanol, and acetone) on the hydrogen bond between glycitein and various solvents were investigated. This study aimed to determine the electronic energies, geometric parameters, solvent effects, and so forth of the molecules in question. The results obtained from DFT and the topological parameters suggest that the most stable clusters are found to be stabilized by hydrogen bonds formed with the hydroxyl group of glycitein and the carbonyl group of acetone or with the carbonyl group of glycitein and MeOH/EtOH. The UV–vis adsorption spectra were calculated with TD-DFT to investigate the electronic properties. The analysis of the solvent effect demonstrated that the polar solvent stabilizes the complexes. The changes of the OH bond lengths are larger in the three solvents because of the polar environments.

Methodology

All the computations have been performed using the Gaussian 09 Revision E.01 software package[20] Because of the excellent computational time and electronic properties (such as electronic structures, vibrational frequencies, and so forth), the DFT method has been used. The B3LYP-D3 approach was carried out. This approach is a hybrid functional of the DFT method, and it contains the Becke’s three-parameter nonlocal exchange functional with the correlation functional of the Lee–Yang–Parr (B3LYP) method and the Grimme’s D3 dispersion correction.[33] Previous studies on small hydrogen-bonded molecular clusters were found to offer very accurate electronic energetics, vibrational frequencies, structural information, and so forth.[24,34−38] Moreover, the Dunning’s correlation consistent triple-zeta basis set (cc-pVTZ) was used throughout the computational process. Vibrational frequencies of the optimized structures were computed at the same level of theory to confirm the nature of stationary points. The corresponding ZPVE correction and thermodynamic corrections were added to electronic energies. Meanwhile, BSSE was added to BEs by using the typical counterpoise method.[39] For UV–vis calculations, the electronic maximum absorption wavelengths λmax of glycitein and MeOHglycitein in the MeOH solvent were computed using the TD-DFT method at the B3LYP-D3/cc-pVTZ level. Several different solutions (methanol, ethanol, and acetone) to investigate the influence of the solvent on hydrogen bonds were used, and the corresponding effects were compared with those in the gas phase. The solvation effects were calculated considering the cavity of series of spheres by the aid of the means of the self-consistent reaction field method with the integral equation formalism variant model.[40] The analysis of the electronic charge density (ρ), its Laplacian ∇2ρ at BCPs, changes in atomic charge Δq(H), and changes of atomic energy ΔE(H) at the H atom was performed by making use of the theory of molecular structure to investigate the nature of hydrogen bonds. The topological QTAIM was performed using the “output = WFN” option for the AIM keyword as implemented in Gaussian 09 Revision E.01 and AIM2000 software.
  23 in total

1.  Variations in isoflavone levels in soy foods and soy protein isolates and issues related to isoflavone databases and food labeling.

Authors:  Kenneth D R Setchell; Sidney J Cole
Journal:  J Agric Food Chem       Date:  2003-07-02       Impact factor: 5.279

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Authors:  Yang Liu; Guochun Yang; Martin Losada; Yunjie Xu
Journal:  J Chem Phys       Date:  2010-06-21       Impact factor: 3.488

3.  A DFT-based study of the hydrogen-bonding interactions between myricetin and ethanol/water.

Authors:  Yan-Zhen Zheng; Geng Deng; Rui Guo; Da-Fu Chen; Li-Ming Wu
Journal:  J Mol Model       Date:  2019-02-14       Impact factor: 1.810

4.  Effects of methylation in acceptors on the hydrogen bond complexes between 2,2,2-trifluoroethanol and cyclic ethers.

Authors:  Shanshan Tang; Lin Du
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2019-03-27       Impact factor: 4.098

5.  A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu.

Authors:  Stefan Grimme; Jens Antony; Stephan Ehrlich; Helge Krieg
Journal:  J Chem Phys       Date:  2010-04-21       Impact factor: 3.488

6.  Estrogenic activity of glycitein, a soy isoflavone.

Authors:  T T Song; S Hendrich; P A Murphy
Journal:  J Agric Food Chem       Date:  1999-04       Impact factor: 5.279

7.  Antiproliferative and antiangiogenic activities of genistein in human renal cell carcinoma.

Authors:  Hiroto Sasamura; Atsushi Takahashi; Jinyang Yuan; Hiroshi Kitamura; Naoya Masumori; Noriomi Miyao; Naoki Itoh; Taiji Tsukamoto
Journal:  Urology       Date:  2004-08       Impact factor: 2.649

8.  Fundamental and overtone vibrational spectroscopy, enthalpy of hydrogen bond formation and equilibrium constant determination of the methanol-dimethylamine complex.

Authors:  Lin Du; Kasper Mackeprang; Henrik G Kjaergaard
Journal:  Phys Chem Chem Phys       Date:  2013-05-21       Impact factor: 3.676

9.  Hydrogen bond docking preference in furans: OH⋯π vs. OH⋯O.

Authors:  Xiaotong Jiang; Narcisse T Tsona; Shanshan Tang; Lin Du
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2017-10-02       Impact factor: 4.098

10.  Ring-Size Effects on the Stability and Spectral Shifts of Hydrogen Bonded Cyclic Ethers Complexes.

Authors:  Shanshan Tang; Narcisse T Tsona; Lin Du
Journal:  Sci Rep       Date:  2018-01-24       Impact factor: 4.379

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