Literature DB >> 31680698

Incorporating genomic methods into contact networks to reveal new insights into animal behavior and infectious disease dynamics.

Marie L J Gilbertson1, Nicholas M Fountain-Jones1, Meggan E Craft1.   

Abstract

Utilization of contact networks has provided opportunities for assessing the dynamic interplay between pathogen transmission and host behavior. Genomic techniques have, in their own right, provided new insight into complex questions in disease ecology, and the increasing accessibility of genomic approaches means more researchers may seek out these tools. The integration of network and genomic approaches provides opportunities to examine the interaction between behavior and pathogen transmission in new ways and with greater resolution. While a number of studies have begun to incorporate both contact network and genomic approaches, a great deal of work has yet to be done to better integrate these techniques. In this review, we give a broad overview of how network and genomic approaches have each been used to address questions regarding the interaction of social behavior and infectious disease, and then discuss current work and future horizons for the merging of these techniques.

Entities:  

Keywords:  Social network; genetics; network modeling; phylodynamics; strain sharing; transmission tree; wildlife

Year:  2019        PMID: 31680698      PMCID: PMC6824548          DOI: 10.1163/1568539X-00003471

Source DB:  PubMed          Journal:  Behaviour        ISSN: 0005-7959            Impact factor:   1.991


  99 in total

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Authors:  David C Wheeler; Lance A Waller; Roman Biek
Journal:  Spat Spatiotemporal Epidemiol       Date:  2010-07

Review 5.  Epidemic dynamics at the human-animal interface.

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Journal:  Science       Date:  2009-12-04       Impact factor: 47.728

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Journal:  Mol Ecol       Date:  2012-07-27       Impact factor: 6.185

7.  Network-based vaccination improves prospects for disease control in wild chimpanzees.

Authors:  Julie Rushmore; Damien Caillaud; Richard J Hall; Rebecca M Stumpf; Lauren Ancel Meyers; Sonia Altizer
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8.  Genetic evidence that culling increases badger movement: implications for the spread of bovine tuberculosis.

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Journal:  Mol Ecol       Date:  2007-10-16       Impact factor: 6.185

Review 9.  Infecting epidemiology with genetics: a new frontier in disease ecology.

Authors:  Elizabeth A Archie; Gordon Luikart; Vanessa O Ezenwa
Journal:  Trends Ecol Evol       Date:  2008-11-21       Impact factor: 17.712

10.  Genomic Infectious Disease Epidemiology in Partially Sampled and Ongoing Outbreaks.

Authors:  Xavier Didelot; Christophe Fraser; Jennifer Gardy; Caroline Colijn
Journal:  Mol Biol Evol       Date:  2017-04-01       Impact factor: 16.240

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Journal:  PLoS Pathog       Date:  2021-03-18       Impact factor: 6.823

4.  Apathogenic proxies for transmission dynamics of a fatal virus.

Authors:  Marie L J Gilbertson; Nicholas M Fountain-Jones; Jennifer L Malmberg; Roderick B Gagne; Justin S Lee; Simona Kraberger; Sarah Kechejian; Raegan Petch; Elliott S Chiu; Dave Onorato; Mark W Cunningham; Kevin R Crooks; W Chris Funk; Scott Carver; Sue VandeWoude; Kimberly VanderWaal; Meggan E Craft
Journal:  Front Vet Sci       Date:  2022-09-08
  4 in total

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