Literature DB >> 31674080

Five genes as a novel signature for predicting the prognosis of patients with laryngeal cancer.

Guihai Zhang1, Erxi Fan1, Guojun Yue1, Qiuyue Zhong1, Yu Shuai1, Mingna Wu1, Guangyong Feng1, Qiying Chen1, Xiaoxia Gou1.   

Abstract

In this study, we purpose to investigate a novel five-gene signature for predicting the prognosis of patients with laryngeal cancer. The laryngeal cancer datasets were obtained from The Cancer Genome Atlas (TCGA). Both univariate and multivariate Cox regression analysis was applied to screening for prognostic differential expressed genes (DEGs), and a novel gene signature was obtained. The performance of this Cox regression model was tested by receiver operating characteristic (ROC) curves and area under the curve (AUC). Further survival analysis for each of the five genes was carried out through the Kaplan-Meier curve and Log-rank test. Totally, 622 DEGs were screened from the TCGA datasets in this study. We construct a five-gene signature through Cox survival analysis. Patients were divided into low- and high-risk groups depending on the median risk score, and a significant difference of the 5-year overall survival was found between these two groups (P < .05). ROC curves verified that this five-gene signature had good performance to predict the prognosis of laryngeal cancer (AUC = 0.862, P < .05). In conclusion, the five-gene signature consist of EMP1, HOXB9, DPY19L2P1, MMP1, and KLHDC7B might be applied as an independent prognosis predictor of laryngeal cancer.
© 2019 Wiley Periodicals, Inc.

Entities:  

Keywords:  Cox regression model; TCGA; laryngeal cancer; prognostic signature

Year:  2019        PMID: 31674080     DOI: 10.1002/jcb.29535

Source DB:  PubMed          Journal:  J Cell Biochem        ISSN: 0730-2312            Impact factor:   4.429


  12 in total

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