| Literature DB >> 31663278 |
Li-Li Zhang1, Chun-Wen Li2, Kang Liu3, Zhong Liu4, Bo-Cheng Liang3, Yi-Ran Yang4, Xiao-Lin Shi3.
Abstract
OBJECTIVE: For the purpose of providing evidence for the treatment of osteoporosis and osteopenia, this study retrospectively identified succinylation-modified sites and proteins in postmenopausal women, and bioinformatics analysis were performed.Entities:
Keywords: Osteopenia; Osteoporosis; Post-Translational Modification; Succinylation
Mesh:
Substances:
Year: 2019 PMID: 31663278 PMCID: PMC6819194 DOI: 10.1111/os.12519
Source DB: PubMed Journal: Orthop Surg ISSN: 1757-7853 Impact factor: 2.071
Figure 1Overview of research process.
Figure 2Numbers of quantified succinylation sites and proteins in the three comparison groups.
Subcellular structure of up‐regulated proteins and down‐regulated proteins
| Comparison group | Subcellular location (number of proteins) | ||||||
|---|---|---|---|---|---|---|---|
| Extracellular | Endoplasmic reticulum | Plasma membrane | Nucleus | Cyto_nucl | Mitochondria | Cytoplasm | |
| Osteopenia/Normal | 15 | 1 | 0 | 7 | 0 | 2 | 3 |
| Osteoporosis/Osteopenia | 15 | 1 | 1 | 6 | 1 | 2 | 3 |
| Osteoporosis/Normal | 16 | 1 | 0 | 6 | 1 | 2 | 2 |
Figure 3Functional enrichment analysis in Osteoporosis/Osteopenia comparison group.
Figure 4Functional enrichment analysis in Osteopenia/Normal comparison group.
Figure 5Functional enrichment analysis in Osteoporosis/Normal comparison group.
Figure 6KEGG pathway enrichment in Osteopenia/Normal comparison group.
Significant enrichment of the corresponding differentially modified proteins from different comparison groups
| Comparison group | Protein accession | Ratio | Regulated type | Protein names | Gene names | Score |
|---|---|---|---|---|---|---|
| Osteopenia/Normal | P00738 | 0.78 | Down | Haptoglobin | HPT | 96.866 |
| Osteopenia/Normal | P00738 | 2.77 | Up | Haptoglobin | HPT | 108.14 |
| Osteopenia/Normal | P00738 | 2.1 | Up | Haptoglobin | HPT | 129.42 |
| Osteopenia/Normal | P00738 | 1.24 | Up | Haptoglobin | HPT | 120.63 |
| Osteopenia/Normal | P00738 | 0.63 | Down | Haptoglobin | HPT | 126.71 |
| Ostoeporosis/Osteopenia | P00738 | 2.52 | Up | Haptoglobin | HPT | 96.866 |
| Ostoeporosis/Osteopenia | P00738 | 0.69 | Down | Haptoglobin | HPT | 120.63 |
| Ostoeporosis/Normal | P00738 | 1.57 | Up | Haptoglobin | HPT | 96.866 |
| Ostoeporosis/Normal | P00738 | 0.77 | Down | Haptoglobin | HPT | 126.71 |
| Osteopenia/Normal | P02647 | 0.76 | Down | Apolipoprotein A‐I | APOA1 | 99.343 |
| Osteopenia/Normal | P02647 | 0.66 | Down | Apolipoprotein A‐I | APOA1 | 125.57 |
| Osteopenia/Normal | P02647 | 0.42 | Down | Apolipoprotein A‐I | APOA1 | 86.367 |
| Ostoeporosis/Osteopenia | P02647 | 1.24 | Up | Apolipoprotein A‐I | APOA1 | 99.343 |
| Ostoeporosis/Normal | P02647 | 1.41 | Up | Apolipoprotein A‐I | APOA1 | 99.343 |
| Ostoeporosis/Normal | P02647 | 1.94 | Up | Apolipoprotein A‐I | APOA1 | 125.57 |
| Ostoeporosis/Normal | P02647 | 2.45 | Up | Apolipoprotein A‐I | APOA1 | 86.367 |
| Ostoeporosis/Normal | P02647 | 1.54 | Up | Apolipoprotein A‐I | APOA1 | 65.809 |
| Osteopenia/Normal | P02652 | 1.79 | Up | Apolipoprotein A‐II | APOA2 | 115.91 |
| Ostoeporosis/Osteopenia | P02652 | 0.37 | Down | Apolipoprotein A‐II | APOA2 | 115.91 |
| Ostoeporosis/Normal | P02652 | 0.62 | Down | Apolipoprotein A‐II | APOA2 | 115.91 |
| Ostoeporosis/Normal | P02652 | 2.69 | Up | Apolipoprotein A‐II | APOA2 | 111.06 |
| Osteopenia/Normal | P69905 | 2.03 | Up | Hemoglobin subunit alpha | HBA | 77.899 |
| Osteopenia/Normal | P69905 | 0.5 | Down | Hemoglobin subunit alpha | HBA | 100.45 |
Figure 7Biological process.
Figure 8Cellular component.
Figure 9Molecular function.