Literature DB >> 31662859

Gut microbiome in chronic rheumatic and inflammatory bowel diseases: Similarities and differences.

Fatouma Salem1, Nadège Kindt1, Julian R Marchesi2,3, Patrick Netter1, Anthony Lopez4,5, Tunay Kokten4, Silvio Danese6, Jean-Yves Jouzeau1, Laurent Peyrin-Biroulet4,5, David Moulin1,7.   

Abstract

Introduction: Inflammatory bowel diseases (IBDs) and chronic rheumatic diseases (CRDs) are systemic chronic disorders sharing common genetic, immune and environmental factors. About half of patients with IBD develop rheumatic ailments and microscopic intestinal inflammation is present in up to half of CRD patients. IBD and CRD patients also share a common therapeutic armamentarium. Disequilibrium in the complex realm of microbes (known as dysbiosis) that closely interact with the gut mucosal immune system has been associated with both IBD and CRD (spondyloarthritis and rheumatoid arthritis). Whether dysbiosis represents an epiphenomenon or a prodromal feature remains to be determined.
Methods: In an attempt to further investigate whether specific gut dysbiosis may be the missing link between IBD and CRD in patients developing both diseases, we performed here a systematic literature review focusing on studies looking at bacterial microbiota in CRD and/or IBD patients.
Results: We included 80 studies, with a total of 3799 IBD patients without arthritis, 1084 CRD patients without IBD, 132 IBD patients with arthropathy manifestations and 12 spondyloarthritis patients with IBD history. Overall, this systematic review indicates that an increase in Bifidobacterium, Staphylococcus, Enterococcus, Lactobacillus, Pseudomonas, Klebsiella and Proteus genera, as well as a decrease in Faecalibacterium, Roseburia genera and species belonging to Verrucomicrobia and Fusobacteria phyla are common features in IBD and CRD patients, whereas dozens of bacterial species are specific features of CRD and IBD.
Conclusion: Further work is needed to understand the functions of bacteria and of their metabolites but also to characterize fungi and viruses that are commonly found in these patients. © Author(s) 2019.

Entities:  

Keywords:  Inflammatory bowel disease; chronic rheumatic diseases; gut microbiota; immunity; inflammation

Mesh:

Year:  2019        PMID: 31662859      PMCID: PMC6794689          DOI: 10.1177/2050640619867555

Source DB:  PubMed          Journal:  United European Gastroenterol J        ISSN: 2050-6406            Impact factor:   4.623


  96 in total

1.  Comparison of sulfasalazine and placebo in the treatment of psoriatic arthritis. A Department of Veterans Affairs Cooperative Study.

Authors:  D O Clegg; D J Reda; E Mejias; G W Cannon; M H Weisman; T Taylor; E Budiman-Mak; W D Blackburn; F B Vasey; M L Mahowald; J J Cush; H R Schumacher; S L Silverman; F P Alepa; M E Luggen; M R Cohen; R Makkena; C M Haakenson; R H Ward; B J Manaster; R J Anderson; J R Ward; W G Henderson
Journal:  Arthritis Rheum       Date:  1996-12

2.  Connecting dysbiosis, bile-acid dysmetabolism and gut inflammation in inflammatory bowel diseases.

Authors:  Henri Duboc; Sylvie Rajca; Dominique Rainteau; David Benarous; Marie-Anne Maubert; Elodie Quervain; Ginette Thomas; Véronique Barbu; Lydie Humbert; Guillaume Despras; Chantal Bridonneau; Fabien Dumetz; Jean-Pierre Grill; Joëlle Masliah; Laurent Beaugerie; Jacques Cosnes; Olivier Chazouillères; Raoul Poupon; Claude Wolf; Jean-Maurice Mallet; Philippe Langella; Germain Trugnan; Harry Sokol; Philippe Seksik
Journal:  Gut       Date:  2012-09-19       Impact factor: 23.059

3.  Low counts of Faecalibacterium prausnitzii in colitis microbiota.

Authors:  H Sokol; P Seksik; J P Furet; O Firmesse; I Nion-Larmurier; L Beaugerie; J Cosnes; G Corthier; P Marteau; J Doré
Journal:  Inflamm Bowel Dis       Date:  2009-08       Impact factor: 5.325

4.  Butyricicoccus pullicaecorum in inflammatory bowel disease.

Authors:  Venessa Eeckhaut; Kathleen Machiels; Clémentine Perrier; Carlos Romero; Sofie Maes; Bram Flahou; Marjan Steppe; Freddy Haesebrouck; Benedikt Sas; Richard Ducatelle; Severine Vermeire; Filip Van Immerseel
Journal:  Gut       Date:  2012-12-22       Impact factor: 23.059

5.  Alterations of the dominant faecal bacterial groups in patients with Crohn's disease of the colon.

Authors:  P Seksik; L Rigottier-Gois; G Gramet; M Sutren; P Pochart; P Marteau; R Jian; J Doré
Journal:  Gut       Date:  2003-02       Impact factor: 23.059

6.  An expansion of rare lineage intestinal microbes characterizes rheumatoid arthritis.

Authors:  Jun Chen; Kerry Wright; John M Davis; Patricio Jeraldo; Eric V Marietta; Joseph Murray; Heidi Nelson; Eric L Matteson; Veena Taneja
Journal:  Genome Med       Date:  2016-04-21       Impact factor: 11.117

7.  A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients.

Authors:  Andrew Brantley Hall; Moran Yassour; Jenny Sauk; Ashley Garner; Xiaofang Jiang; Timothy Arthur; Georgia K Lagoudas; Tommi Vatanen; Nadine Fornelos; Robin Wilson; Madeline Bertha; Melissa Cohen; John Garber; Hamed Khalili; Dirk Gevers; Ashwin N Ananthakrishnan; Subra Kugathasan; Eric S Lander; Paul Blainey; Hera Vlamakis; Ramnik J Xavier; Curtis Huttenhower
Journal:  Genome Med       Date:  2017-11-28       Impact factor: 11.117

8.  Analysis of Gut Microbiota in Rheumatoid Arthritis Patients: Disease-Related Dysbiosis and Modifications Induced by Etanercept.

Authors:  Andrea Picchianti-Diamanti; Concetta Panebianco; Simonetta Salemi; Maria Laura Sorgi; Roberta Di Rosa; Alessandro Tropea; Mayla Sgrulletti; Gerardo Salerno; Fulvia Terracciano; Raffaele D'Amelio; Bruno Laganà; Valerio Pazienza
Journal:  Int J Mol Sci       Date:  2018-09-27       Impact factor: 5.923

9.  Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.

Authors:  Luke Jostins; Stephan Ripke; Rinse K Weersma; Richard H Duerr; Dermot P McGovern; Ken Y Hui; James C Lee; L Philip Schumm; Yashoda Sharma; Carl A Anderson; Jonah Essers; Mitja Mitrovic; Kaida Ning; Isabelle Cleynen; Emilie Theatre; Sarah L Spain; Soumya Raychaudhuri; Philippe Goyette; Zhi Wei; Clara Abraham; Jean-Paul Achkar; Tariq Ahmad; Leila Amininejad; Ashwin N Ananthakrishnan; Vibeke Andersen; Jane M Andrews; Leonard Baidoo; Tobias Balschun; Peter A Bampton; Alain Bitton; Gabrielle Boucher; Stephan Brand; Carsten Büning; Ariella Cohain; Sven Cichon; Mauro D'Amato; Dirk De Jong; Kathy L Devaney; Marla Dubinsky; Cathryn Edwards; David Ellinghaus; Lynnette R Ferguson; Denis Franchimont; Karin Fransen; Richard Gearry; Michel Georges; Christian Gieger; Jürgen Glas; Talin Haritunians; Ailsa Hart; Chris Hawkey; Matija Hedl; Xinli Hu; Tom H Karlsen; Limas Kupcinskas; Subra Kugathasan; Anna Latiano; Debby Laukens; Ian C Lawrance; Charlie W Lees; Edouard Louis; Gillian Mahy; John Mansfield; Angharad R Morgan; Craig Mowat; William Newman; Orazio Palmieri; Cyriel Y Ponsioen; Uros Potocnik; Natalie J Prescott; Miguel Regueiro; Jerome I Rotter; Richard K Russell; Jeremy D Sanderson; Miquel Sans; Jack Satsangi; Stefan Schreiber; Lisa A Simms; Jurgita Sventoraityte; Stephan R Targan; Kent D Taylor; Mark Tremelling; Hein W Verspaget; Martine De Vos; Cisca Wijmenga; David C Wilson; Juliane Winkelmann; Ramnik J Xavier; Sebastian Zeissig; Bin Zhang; Clarence K Zhang; Hongyu Zhao; Mark S Silverberg; Vito Annese; Hakon Hakonarson; Steven R Brant; Graham Radford-Smith; Christopher G Mathew; John D Rioux; Eric E Schadt; Mark J Daly; Andre Franke; Miles Parkes; Severine Vermeire; Jeffrey C Barrett; Judy H Cho
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

10.  A Preliminary Study Examining the Binding Capacity of Akkermansia muciniphila and Desulfovibrio spp., to Colonic Mucin in Health and Ulcerative Colitis.

Authors:  Helen Earley; Grainne Lennon; Aine Balfe; Michelle Kilcoyne; Marguerite Clyne; Lokesh Joshi; Stephen Carrington; Sean T Martin; J Calvin Coffey; Desmond C Winter; P Ronan O'Connell
Journal:  PLoS One       Date:  2015-10-22       Impact factor: 3.240

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  13 in total

1.  Group 3 innate lymphoid cells require BATF to regulate gut homeostasis in mice.

Authors:  Xiaopeng Wu; Achia Khatun; Moujtaba Y Kasmani; Yao Chen; Shikan Zheng; Samantha Atkinson; Christine Nguyen; Robert Burns; Elizabeth J Taparowsky; Nita H Salzman; Timothy W Hand; Weiguo Cui
Journal:  J Exp Med       Date:  2022-09-01       Impact factor: 17.579

2.  Microbiota-derived acetate activates intestinal innate immunity via the Tip60 histone acetyltransferase complex.

Authors:  Bat-Erdene Jugder; Layla Kamareddine; Paula I Watnick
Journal:  Immunity       Date:  2021-06-08       Impact factor: 43.474

Review 3.  The gut-joint axis in rheumatoid arthritis.

Authors:  Mario M Zaiss; Hsin-Jung Joyce Wu; Daniele Mauro; Georg Schett; Francesco Ciccia
Journal:  Nat Rev Rheumatol       Date:  2021-03-05       Impact factor: 32.286

4.  Longitudinal profiling of the gut microbiome in patients with psoriatic arthritis and ankylosing spondylitis: a multicentre, prospective, observational study.

Authors:  Jesus Miguens Blanco; Federica Borghese; Neil McHugh; Peter Kelleher; Raj Sengupta; Julian R Marchesi; Sonya Abraham
Journal:  BMC Rheumatol       Date:  2020-11-10

5.  Experiences and perceptions of patients with psoriatic arthritis participating in a trial of faecal microbiota transplantation: a nested qualitative study.

Authors:  Maja Skov Kragsnaes; Shaun Theodor Sødergren; Jens Kjeldsen; Hans Christian Horn; Heidi Lausten Munk; Jens Kristian Pedersen; Camilla Schufri Klinkby; Maarten de Wit; Nanna Gram Ahlmark; Tine Tjørnhøj-Thomsen; Torkell Ellingsen
Journal:  BMJ Open       Date:  2021-03-08       Impact factor: 2.692

6.  Upregulated IL-32 Expression And Reduced Gut Short Chain Fatty Acid Caproic Acid in People Living With HIV With Subclinical Atherosclerosis.

Authors:  Mohamed El-Far; Madeleine Durand; Isabelle Turcotte; Etienne Larouche-Anctil; Mohamed Sylla; Sarah Zaidan; Carl Chartrand-Lefebvre; Rémi Bunet; Hardik Ramani; Manel Sadouni; Irina Boldeanu; Annie Chamberland; Sylvie Lesage; Jean-Guy Baril; Benoit Trottier; Réjean Thomas; Emmanuel Gonzalez; Ali Filali-Mouhim; Jean-Philippe Goulet; Jeffrey A Martinson; Seble Kassaye; Roksana Karim; Jorge R Kizer; Audrey L French; Stephen J Gange; Petronela Ancuta; Jean-Pierre Routy; David B Hanna; Robert C Kaplan; Nicolas Chomont; Alan L Landay; Cécile L Tremblay
Journal:  Front Immunol       Date:  2021-04-15       Impact factor: 8.786

7.  Identification and characterization of a novel Enterococcus bacteriophage with potential to ameliorate murine colitis.

Authors:  Junko Nishio; Hideo Negishi; Mika Yasui-Kato; Shoji Miki; Kazuhiko Miyanaga; Kotaro Aoki; Takuma Mizusawa; Masami Ueno; Akira Ainai; Masafumi Muratani; Sho Hangai; Hideyuki Yanai; Hideki Hasegawa; Yoshikazu Ishii; Yasunori Tanji; Tadatsugu Taniguchi
Journal:  Sci Rep       Date:  2021-10-12       Impact factor: 4.379

Review 8.  Roseburia intestinalis: A Beneficial Gut Organism From the Discoveries in Genus and Species.

Authors:  Kai Nie; Kejia Ma; Weiwei Luo; Zhaohua Shen; Zhenyu Yang; Mengwei Xiao; Ting Tong; Yuanyuan Yang; Xiaoyan Wang
Journal:  Front Cell Infect Microbiol       Date:  2021-11-22       Impact factor: 5.293

9.  Dietary Alaska Pollock Protein Attenuates the Experimental Colitis Induced by Dextran Sulfate Sodium via Regulation of Gut Microbiota and Its Metabolites in Mice.

Authors:  Genki Tanaka; Nozomi Hagihara; Ryota Hosomi; Takaki Shimono; Seiji Kanda; Toshimasa Nishiyama; Munehiro Yoshida; Kenji Fukunaga
Journal:  Metabolites       Date:  2022-01-07

10.  Characteristics of Fecal Microbiota and Machine Learning Strategy for Fecal Invasive Biomarkers in Pediatric Inflammatory Bowel Disease.

Authors:  Xinqiong Wang; Yuan Xiao; Xu Xu; Li Guo; Yi Yu; Na Li; Chundi Xu
Journal:  Front Cell Infect Microbiol       Date:  2021-12-07       Impact factor: 5.293

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