| Literature DB >> 31662680 |
J S Dar1, B A Ganai1, R A Shahardar2, U R Zargar3.
Abstract
The control of the digenetic trematode Fasciola gigantica has been the major challenge in both cattle and small ruminants as there is a paucity of an effective and commercial vaccine. Thus, the accurate identification and prepatent diagnosis of F. gigantica is an essential prerequisite for its successful prevention and control. In the present study, the morphologically identified specimens isolated from the liver and bile ducts of sheep (Ovis aries) were validated through molecular data. The sequence analysis of ITS2 of our isolates showed high degree of similarity with F. gigantica and F. hepatica using BLAST function of NCBI. The phylogenetic analysis of our isolates showed a close relationship with previously described F. gigantica and F. hepatica isolates from different countries. The antigenic profile of somatic and E/S antigens of F. gigantica were revealed by SDS-PAGE and immunoblotting using sera from sheep naturally infected with F. gigantica. By SDS-PAGE, 20 distinct bands were revealed from crude somatic fraction. Immunoblotting analysis of these proteins with positive sera exhibited 8 sero-reactive bands ranging from 14 to 97 kDa. Among these 38 and 44 kDa bands were quite specific with high diagnostic specificity and sensitivity. The E/S fraction comprised 7 distinct bands, as revealed by SDS-PAGE analysis. Immunoblotting analysis of these proteins with positive sera exhibited 6 antigenic bands ranging from 23 - 54 kDa. Among these 27 and 33 kDa were found to be quite specific with high diagnostic specificity and sensitivity. The present study concludes that the protein bands of 38 and 44 kDa in somatic fraction and 27 and 33 kDa in E/S fraction can be used for the immunodiagnostic purpose for this economically important parasite, which may also entice further studies regarding their vaccine potential.Entities:
Keywords: BLAST; Excretory/Secretory antigen (E/S); Fasciola gigantica; ITS-2; Immunoblotting; Sodium dodecyl sulphate–polyacrylamide gel electrophoresis (SDS–PAGE)
Year: 2019 PMID: 31662680 PMCID: PMC6799565 DOI: 10.2478/helm-2019-0003
Source DB: PubMed Journal: Helminthologia ISSN: 0440-6605 Impact factor: 1.184
Fig. 1Agarose gel electrophoresis of ITS-2 rDNA. Lanes 1 – 7 (F. gigantica) and lanes 8 – 12 (F. hepatica).
Fig. 2Minimum Evolution phylogenic tree, the bootstrap test (10000 replicates), based on ITS-2 gene of F. gigantica and F. hepatica, Fascioloides magna (EF534995) designated as outgroup. The analysis involved 30 nucleotide sequences. All ambiguous positions were removed from each sequence pair. There were a total of 367 positions in the final dataset. Evolutionary analyses were conducted in MEGA7.
Comparison of sequence lengths and composition of ITS2 rDNA of Fasiola gigantica from different parts of the world with our isolate JF1.
| Species | Nucleotide Composition | |||||||
|---|---|---|---|---|---|---|---|---|
| Accession No. | ITS 2 (bp) | A+T (%) | G+C (%) | A | C | G | T | |
| MH048702 | 362 | 51.93 | 48.07 | 71 | 80 | 94 | 117 | |
| JN828953 | 349 | 52.15 | 47.85 | 71 | 76 | 91 | 111 | |
| KP760871 | 363 | 52.07 | 47.93 | 71 | 80 | 94 | 118 | |
| KX467878 | 365 | 51.51 | 48.49 | 71 | 82 | 95 | 117 | |
| MF678651 | 362 | 51.93 | 48.07 | 71 | 80 | 94 | 117 | |
| AB207152 | 363 | 51.79 | 48.21 | 71 | 81 | 94 | 117 | |
| AB010977 | 362 | 51.93 | 48.07 | 71 | 80 | 94 | 117 | |
| AB010976 | 362 | 51.93 | 48.07 | 71 | 80 | 94 | 117 | |
| AJ853848 | 363 | 52.07 | 47.93 | 71 | 80 | 94 | 118 | |
Comparison of sequence lengths and composition of ITS2 rDNA of Fasiola hepatica from different parts of the world with our isolate JF4.
| Nucleotide Composition | ||||||||
|---|---|---|---|---|---|---|---|---|
| Species | Accession No. | ITS 2 (bp) | A+T (%) | G+C (%) | A | C | G | T |
| MH048706 | 363 | 51.79 | 48.21 | 70 | 80 | 95 | 118 | |
| MF678650 | 363 | 51.79 | 48.21 | 70 | 80 | 95 | 118 | |
| JN585288 | 362 | 51.38 | 48.62 | 70 | 81 | 95 | 116 | |
| AB553720 | 363 | 51.79 | 48.21 | 70 | 80 | 95 | 118 | |
| AB010978 | 362 | 51.66 | 48.34 | 70 | 80 | 95 | 117 | |
Pairwise distances of the ITS-2 region of Fasciola Spp. from Kashmir India, compared with other sequences submitted to GenBank..
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 6 | 39 | ||
| 100 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 8 | 39 | ||
| 100 | 100 | 0 | 0 | 1 | 1 | 1 | 2 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 6 | 39 | ||
| 100 | 100 | 100 | 0 | 1 | 1 | 1 | 2 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 7 | 39 | ||
| 100 | 100 | 100 | 100 | 1 | 1 | 1 | 2 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 6 | 39 | ||
| 100 | 100 | 100 | 100 | 100 | 0 | 0 | 1 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 8 | 39 | ||
| 100 | 100 | 100 | 100 | 100 | 100 | 0 | 1 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 37 | ||
| 100 | 100 | 100 | 100 | 100 | 100 | 100 | 1 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 6 | 39 | ||
| 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 6 | 40 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 100 | 100 | 0 | 0 | 0 | 0 | 0 | 3 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 100 | 100 | 100 | 0 | 0 | 0 | 0 | 3 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 100 | 100 | 100 | 100 | 0 | 0 | 0 | 3 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 100 | 100 | 100 | 100 | 100 | 0 | 0 | 1 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 0 | 0 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 3 | 39 | ||
| 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 99 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 41 | ||
| 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 93 | 100 |
Below diagonal: percentage similarity; above diagonal: total character differences.
Fig. 3Commassie Brilliant Blue stained protein profile of whole worm extract of Fasciola gigantica from different sheep livers (lane L1-L6), molecular weight marker (M).
Fig. 4Commassie Brilliant Blue stained profile of Excretory/ Secretory antigens of Fasciola gigantica from different sheep livers (lane L1-L5), molecular weight marker (M).
Fig. 5Western blot analysis of somatic antigens of Fasciola gigantica against sera samples M: Molecular weight marker, 1-12: Positive sera of Fasciola gigantica, 13-18: Positive sera of Paramphistomum sp., 19-24: Negative control sera.
Sensitivity, specificity, accuracy, Positive and negative predictive values of most prevalent positive bands using Fasciola gigantica somatic antigens
| Test band (kDa) | Sensitivity (%) | Specificity (%) | Accuracy (%) | Predictive Value | |
|---|---|---|---|---|---|
| Positive (%) | Negative (%) | ||||
| 14 | 58.33 | 100 | 79.16 | 100 | 70.59 |
| 23 | 66.67 | 58.33 | 62.5 | 61.54 | 63.64 |
| 27 | 66.67 | 75 | 70.83 | 72.73 | 69.23 |
| 38 | 100 | 100 | 100 | 100 | 100 |
| 44 | 100 | 100 | 100 | 100 | 100 |
| 66 | 75 | 50 | 62.5 | 60 | 66.67 |
| 84 | 83.33 | 91.67 | 87.5 | 90.91 | 84.62 |
| 97 | 75 | 66.67 | 62.5 | 69.23 | 72.73 |
Fig. 6Western blot analysis of Excretory/secretory antigens of Fasciola gigantica against sera samples M: Molecular weight marker, 1-12: Positive sera of Fasciola gigantica, 13-18: Positive sera of Paramphistomum sp., 19-24: Negative control sera.
Sensitivity, specificity, accuracy, Positive and negative predictive values of most prevalent positive bands using Fasciola gigantica E/S antigens.
| Test band (kDa) | Sensitivity (%) | Specificity (%) | Accuracy (%) | Predictive Value | |
|---|---|---|---|---|---|
| Positive (%) | Negative (%) | ||||
| 23 | 66.67 | 75 | 70.83 | 72.73 | 69.23 |
| 27 | 100 | 100 | 100 | 100 | 100 |
| 29 | 83.33 | 100 | 91.66 | 100 | 85.71 |
| 33 | 100 | 83.33 | 91.66 | 85.71 | 100 |
| 44 | 75 | 100 | 87.5 | 100 | 80 |
| 54 | 83.83 | 66.67 | 75 | 71.43 | 80 |