Literature DB >> 31656776

Whole genome sequencing in Mycobacterium tuberculosis.

Andrea Spitaleri1, Arash Ghodousi1, Paolo Miotto1, Daniela Maria Cirillo1.   

Abstract

Year:  2019        PMID： 31656776      PMCID： PMC6789317          DOI： 10.21037/atm.2019.07.28

Source DB:  PubMed          Journal:  Ann Transl Med        ISSN： 2305-5839


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  14 in total

Review 1.  Diagnostic accuracy and reproducibility of WHO-endorsed phenotypic drug susceptibility testing methods for first-line and second-line antituberculosis drugs.

Authors:  David J Horne; Lancelot M Pinto; Matthew Arentz; S-Y Grace Lin; Edward Desmond; Laura L Flores; Karen R Steingart; Jessica Minion
Journal:  J Clin Microbiol       Date:  2012-11-14       Impact factor: 5.948

Review 2.  Low-level antibacterial resistance: a gateway to clinical resistance.

Authors:  F Baquero
Journal:  Drug Resist Updat       Date:  2001-04       Impact factor: 18.500

Review 3.  The Case for Using Higher Doses of First Line Anti-Tuberculosis Drugs to Optimize Efficacy.

Authors:  Sylvain Goutelle; Laurent Bourguignon; Pascal Maire; Roger W Jelliffe; Michael N Neely
Journal:  Curr Pharm Des       Date:  2014       Impact factor: 3.116

4.  Strain-specific suppression of microRNA-320 by carcinogenic Helicobacter pylori promotes expression of the antiapoptotic protein Mcl-1.

Authors:  Jennifer M Noto; M Blanca Piazuelo; Rupesh Chaturvedi; Courtney A Bartel; Elizabeth J Thatcher; Alberto Delgado; Judith Romero-Gallo; Keith T Wilson; Pelayo Correa; James G Patton; Richard M Peek
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2013-10-17       Impact factor: 4.052

Review 5.  Mycobacterium tuberculosis Next-Generation Whole Genome Sequencing: Opportunities and Challenges.

Authors:  Thato Iketleng; Richard Lessells; Mlungisi Thabiso Dlamini; Tuelo Mogashoa; Lucy Mupfumi; Sikhulile Moyo; Simani Gaseitsiwe; Tulio de Oliveira
Journal:  Tuberc Res Treat       Date:  2018-12-09

6.  Whole-Genome Sequencing for Drug Resistance Profile Prediction in Mycobacterium tuberculosis.

Authors:  Sebastian M Gygli; Peter M Keller; Matthias Egger; Sebastien Gagneux; Erik C Böttger; Marie Ballif; Nicolas Blöchliger; Rico Hömke; Miriam Reinhard; Chloé Loiseau; Claudia Ritter; Peter Sander; Sonia Borrell; Jimena Collantes Loo; Anchalee Avihingsanon; Joachim Gnokoro; Marcel Yotebieng
Journal:  Antimicrob Agents Chemother       Date:  2019-03-27       Impact factor: 5.191

7.  Isoniazid Resistance in Mycobacterium tuberculosis Is a Heterogeneous Phenotype Composed of Overlapping MIC Distributions with Different Underlying Resistance Mechanisms.

Authors:  Claudio U Köser; Daniela Maria Cirillo; Arash Ghodousi; Elisa Tagliani; Eranga Karunaratne; Stefan Niemann; Jennifer Perera
Journal:  Antimicrob Agents Chemother       Date:  2019-06-24       Impact factor: 5.191

Review 8.  Treating tuberculosis with high doses of anti-TB drugs: mechanisms and outcomes.

Authors:  Yuhui Xu; Jianan Wu; Sha Liao; Zhaogang Sun
Journal:  Ann Clin Microbiol Antimicrob       Date:  2017-10-03       Impact factor: 3.944

9.  Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase.

Authors:  Matthew Ezewudo; Amanda Borens; Álvaro Chiner-Oms; Paolo Miotto; Leonid Chindelevitch; Angela M Starks; Debra Hanna; Richard Liwski; Matteo Zignol; Christopher Gilpin; Stefan Niemann; Thomas Andreas Kohl; Robin M Warren; Derrick Crook; Sebastien Gagneux; Sven Hoffner; Camilla Rodrigues; Iñaki Comas; David M Engelthaler; David Alland; Leen Rigouts; Christoph Lange; Keertan Dheda; Rumina Hasan; Ruth McNerney; Daniela M Cirillo; Marco Schito; Timothy C Rodwell; James Posey
Journal:  Sci Rep       Date:  2018-10-18       Impact factor: 4.379

10.  Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing.

Authors:  Caroline Allix-Béguec; Irena Arandjelovic; Lijun Bi; Patrick Beckert; Maryline Bonnet; Phelim Bradley; Andrea M Cabibbe; Irving Cancino-Muñoz; Mark J Caulfield; Angkana Chaiprasert; Daniela M Cirillo; David A Clifton; Iñaki Comas; Derrick W Crook; Maria R De Filippo; Han de Neeling; Roland Diel; Francis A Drobniewski; Kiatichai Faksri; Maha R Farhat; Joy Fleming; Philip Fowler; Tom A Fowler; Qian Gao; Jennifer Gardy; Deborah Gascoyne-Binzi; Ana-Luiza Gibertoni-Cruz; Ana Gil-Brusola; Tanya Golubchik; Ximena Gonzalo; Louis Grandjean; Guangxue He; Jennifer L Guthrie; Sarah Hoosdally; Martin Hunt; Zamin Iqbal; Nazir Ismail; James Johnston; Faisal M Khanzada; Chiea C Khor; Thomas A Kohl; Clare Kong; Sam Lipworth; Qingyun Liu; Gugu Maphalala; Elena Martinez; Vanessa Mathys; Matthias Merker; Paolo Miotto; Nerges Mistry; David A J Moore; Megan Murray; Stefan Niemann; Shaheed V Omar; Rick T-H Ong; Tim E A Peto; James E Posey; Therdsak Prammananan; Alexander Pym; Camilla Rodrigues; Mabel Rodrigues; Timothy Rodwell; Gian M Rossolini; Elisabeth Sánchez Padilla; Marco Schito; Xin Shen; Jay Shendure; Vitali Sintchenko; Alex Sloutsky; E Grace Smith; Matthew Snyder; Karine Soetaert; Angela M Starks; Philip Supply; Prapat Suriyapol; Sabira Tahseen; Patrick Tang; Yik-Ying Teo; Thuong N T Thuong; Guy Thwaites; Enrico Tortoli; Dick van Soolingen; A Sarah Walker; Timothy M Walker; Mark Wilcox; Daniel J Wilson; David Wyllie; Yang Yang; Hongtai Zhang; Yanlin Zhao; Baoli Zhu
Journal:  N Engl J Med       Date:  2018-09-26       Impact factor: 91.245
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  3 in total

1.  Diagnostic performance of DNA microarray for detecting rifampicin and isoniazid resistance in Mycobacterium tuberculosis.

Authors:  Bingqi Sun; Ying Sun
Journal:  J Thorac Dis       Date:  2021-07       Impact factor: 2.895

2.  Comparison of metagenomic next-generation sequencing technology, culture and GeneXpert MTB/RIF assay in the diagnosis of tuberculosis.

Authors:  Peixin Chen; Wenwen Sun; Yayi He
Journal:  J Thorac Dis       Date:  2020-08       Impact factor: 2.895

3.  Characterization of antibody response against 16kD and 38kD of M. tuberculosis in the assisted diagnosis of active pulmonary tuberculosis.

Authors:  Xiaohui Hao; Jie Bai; Yingying Ding; Jinhong Wang; Yidian Liu; Lan Yao; Wei Pan
Journal:  Ann Transl Med       Date:  2020-08
  3 in total

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