Literature DB >> 31655397

A single-cell view of tissue regeneration in plants.

Victoria Mironova1, Jian Xu2.   

Abstract

With the development of advanced molecular-genetic and computational technologies it becomes possible to tackle individual cells within a regenerating tissue, to define morphogenetic and cellular changes in space and time by live imaging, to acquire transcriptome status with single-cell RNA sequencing (ScRNA-seq), and to delineate the candidate mechanisms by iterative computational and experimental approaches. Here, we review recent findings and current knowledge on tissue regeneration in plants, focusing on four evolutionarily conserved scenarios that a cell may embark on to facilitate the regeneration of a plant tissue structure lost by injury, namely cell death, division, dedifferentiation, and transdifferentiation. Understanding of these scenarios at single-cell resolution, singularly and in combination, could provide an unprecedented view of tissue regeneration in plants.
Copyright © 2019 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2019        PMID: 31655397     DOI: 10.1016/j.pbi.2019.09.003

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  5 in total

1.  Transcriptional landscapes of de novo root regeneration from detached Arabidopsis leaves revealed by time-lapse and single-cell RNA sequencing analyses.

Authors:  Wu Liu; Yuyun Zhang; Xing Fang; Sorrel Tran; Ning Zhai; Zhengfei Yang; Fu Guo; Lyuqin Chen; Jie Yu; Madalene S Ison; Teng Zhang; Lijun Sun; Hongwu Bian; Yijing Zhang; Li Yang; Lin Xu
Journal:  Plant Commun       Date:  2022-02-25

Review 2.  Decoding and recoding plant development.

Authors:  Sarah Guiziou; Jonah C Chu; Jennifer L Nemhauser
Journal:  Plant Physiol       Date:  2021-10-05       Impact factor: 8.005

3.  Single-cell transcriptome atlas and chromatin accessibility landscape reveal differentiation trajectories in the rice root.

Authors:  Tian-Qi Zhang; Yu Chen; Ye Liu; Wen-Hui Lin; Jia-Wei Wang
Journal:  Nat Commun       Date:  2021-04-06       Impact factor: 14.919

4.  MicroRNA biogenesis and activity in plant cell dedifferentiation stimulated by cell wall removal.

Authors:  Konrad Dełeńko; Przemysław Nuc; Dawid Kubiak; Dawid Bielewicz; Jakub Dolata; Katarzyna Niedojadło; Sylwia Górka; Artur Jarmołowski; Zofia Szweykowska-Kulińska; Janusz Niedojadło
Journal:  BMC Plant Biol       Date:  2022-01-03       Impact factor: 4.215

Review 5.  Mechanisms of stress response in the root stem cell niche.

Authors:  Elena V Ubogoeva; Elena V Zemlyanskaya; Jian Xu; Victoria Mironova
Journal:  J Exp Bot       Date:  2021-10-13       Impact factor: 6.992

  5 in total

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