Literature DB >> 31627855

Reassessment of Paragnomonia (Sydowiellaceae, Diaporthales) and typification of Paragnomonia fragariae, the cause of strawberry root rot and petiole blight.

Inga Moročko-Bičevska1, Jamshid Fatehi2, Olga Sokolova3.   

Abstract

Paragnomonia fragariae is a plant pathogenic ascomycete causing root rot and petiole blight of perennial strawberry in northern Europe. This paper provides a revised description of Paragnomonia and P. fragariae with lecto- and epitypification based on the species original description, recent collections from four European countries, examination of specimens used in the previous taxonomic studies and phylogenetic analyses of DNA sequences of LSU, ITS/5.8S and tef1-α. This study presents the first report of P. fragariae on cultivated strawberry in Finland and Lithuania. Our study on growth rate showed that P. fragariae is a cold-adapted fungus growing almost equally at 5 °C as at 20 °C and attaining maximal growth at 15 °C. New primers were designed for amplification of ca. 0.8 kb fragment of tef1-α of Sydowiella fenestrans. Additionally, newly generated sequences of tef1-α were obtained for the first time from 21 isolates of seven species belonging to five genera of Sydowiellaceae, including the type species S. fenestrans, therefore considerably contributing to the current knowledge on phylogenetic relationships of this insufficiently studied group of fungi. The phylogenetic analysis has also revealed that the recently described species "S." centaureii is genetically distant from the generic type S. fenestrans and other Sydowiella.
Copyright © 2019 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

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Keywords:  Epitype; ITS; LSU; Lectotype; Molecular phylogeny; Translation elongation factor 1-α

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Year:  2019        PMID: 31627855     DOI: 10.1016/j.funbio.2019.08.002

Source DB:  PubMed          Journal:  Fungal Biol


  1 in total

1.  Molecular reassessment of diaporthalean fungi associated with strawberry, including the leaf blight fungus, Paraphomopsis obscurans gen. et comb. nov. (Melanconiellaceae).

Authors:  Dhanushka Udayanga; Shaneya D Miriyagalla; Dimuthu S Manamgoda; Kim S Lewers; Alain Gardiennet; Lisa A Castlebury
Journal:  IMA Fungus       Date:  2021-06-22       Impact factor: 3.515

  1 in total

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