Literature DB >> 31619487

Mechanisms of Neuronal Alternative Splicing and Strategies for Therapeutic Interventions.

Eduardo Javier Lopez Soto1, Michael J Gandal2, Thomas Gonatopoulos-Pournatzis3, Elizabeth A Heller4, Diou Luo5, Sika Zheng6.   

Abstract

Many cellular and physiological processes are coordinated by regulatory networks that produce a remarkable complexity of transcript isoforms. In the mammalian nervous system, alternative pre-mRNA splicing generates functionally distinct isoforms that play key roles in normal physiology, supporting development, plasticity, complex behaviors, and cognition. Neuronal splicing programs controlled by RNA-binding proteins, are influenced by chromatin modifications and can exhibit neuronal subtype specificity. As highlighted in recent publications, aberrant alternative splicing is a major contributor to disease phenotypes. Therefore, understanding the underlying mechanisms of alternative splicing regulation and identifying functional splicing isoforms with critical phenotypic roles are expected to provide a comprehensive resource for therapeutic development, as illuminated by recent successful interventions of spinal muscular atrophy. Here, we discuss the latest progress in the study of the emerging complexity of alternative splicing mechanisms in neurons, and how these findings inform new therapies to correct and control splicing defects.
Copyright © 2019 the authors.

Entities:  

Keywords:  CACNA1B; alternative splicing; autism spectrum disorder (ASD); axonogenesis; chromatin; spinal muscular atrophy (SMA)

Year:  2019        PMID: 31619487      PMCID: PMC6794923          DOI: 10.1523/JNEUROSCI.1149-19.2019

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  96 in total

1.  Misregulation of an Activity-Dependent Splicing Network as a Common Mechanism Underlying Autism Spectrum Disorders.

Authors:  Mathieu Quesnel-Vallières; Zahra Dargaei; Manuel Irimia; Thomas Gonatopoulos-Pournatzis; Joanna Y Ip; Mingkun Wu; Timothy Sterne-Weiler; Shinichi Nakagawa; Melanie A Woodin; Benjamin J Blencowe; Sabine P Cordes
Journal:  Mol Cell       Date:  2016-12-15       Impact factor: 17.970

Review 2.  Alternative splicing: functional diversity among voltage-gated calcium channels and behavioral consequences.

Authors:  Diane Lipscombe; Arturo Andrade; Summer E Allen
Journal:  Biochim Biophys Acta       Date:  2012-09-26

Review 3.  Calcium Channel CaVα₁ Splice Isoforms - Tissue Specificity and Drug Action.

Authors:  Diane Lipscombe; Arturo Andrade
Journal:  Curr Mol Pharmacol       Date:  2015       Impact factor: 3.339

Review 4.  The Role of Functional Prion-Like Proteins in the Persistence of Memory.

Authors:  Kausik Si; Eric R Kandel
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-04-01       Impact factor: 10.005

5.  Alternative Splicing of P/Q-Type Ca2+ Channels Shapes Presynaptic Plasticity.

Authors:  Agnes Thalhammer; Andrea Contestabile; Yaroslav S Ermolyuk; Teclise Ng; Kirill E Volynski; Tuck Wah Soong; Yukiko Goda; Lorenzo A Cingolani
Journal:  Cell Rep       Date:  2017-07-11       Impact factor: 9.423

6.  Contribution of copy number variants involving nonsense-mediated mRNA decay pathway genes to neuro-developmental disorders.

Authors:  Lam S Nguyen; Hyung-Goo Kim; Jill A Rosenfeld; Yiping Shen; James F Gusella; Yves Lacassie; Lawrence C Layman; Lisa G Shaffer; Jozef Gécz
Journal:  Hum Mol Genet       Date:  2013-01-31       Impact factor: 6.150

7.  A mutation in the Srrm4 gene causes alternative splicing defects and deafness in the Bronx waltzer mouse.

Authors:  Yoko Nakano; Israt Jahan; Gregory Bonde; Xingshen Sun; Michael S Hildebrand; John F Engelhardt; Richard J H Smith; Robert A Cornell; Bernd Fritzsch; Botond Bánfi
Journal:  PLoS Genet       Date:  2012-10-04       Impact factor: 5.917

8.  Rates, distribution and implications of postzygotic mosaic mutations in autism spectrum disorder.

Authors:  Elaine T Lim; Mohammed Uddin; Silvia De Rubeis; Yingleong Chan; Anne S Kamumbu; Xiaochang Zhang; Alissa M D'Gama; Sonia N Kim; Robert Sean Hill; Arthur P Goldberg; Christopher Poultney; Nancy J Minshew; Itaru Kushima; Branko Aleksic; Norio Ozaki; Mara Parellada; Celso Arango; Maria J Penzol; Angel Carracedo; Alexander Kolevzon; Christina M Hultman; Lauren A Weiss; Menachem Fromer; Andreas G Chiocchetti; Christine M Freitag; George M Church; Stephen W Scherer; Joseph D Buxbaum; Christopher A Walsh
Journal:  Nat Neurosci       Date:  2017-07-17       Impact factor: 24.884

9.  Pathological impact of SMN2 mis-splicing in adult SMA mice.

Authors:  Kentaro Sahashi; Karen K Y Ling; Yimin Hua; John Erby Wilkinson; Tomoki Nomakuchi; Frank Rigo; Gene Hung; David Xu; Ya-Ping Jiang; Richard Z Lin; Chien-Ping Ko; C Frank Bennett; Adrian R Krainer
Journal:  EMBO Mol Med       Date:  2013-09-09       Impact factor: 12.137

10.  Spinal morphine but not ziconotide or gabapentin analgesia is affected by alternative splicing of voltage-gated calcium channel CaV2.2 pre-mRNA.

Authors:  Yu-Qiu Jiang; Arturo Andrade; Diane Lipscombe
Journal:  Mol Pain       Date:  2013-12-26       Impact factor: 3.395

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  7 in total

1.  Chromatin-mediated alternative splicing regulates cocaine-reward behavior.

Authors:  Song-Jun Xu; Sonia I Lombroso; Delaney K Fischer; Marco D Carpenter; Dylan M Marchione; Peter J Hamilton; Carissa J Lim; Rachel L Neve; Benjamin A Garcia; Mathieu E Wimmer; R Christopher Pierce; Elizabeth A Heller
Journal:  Neuron       Date:  2021-09-03       Impact factor: 18.688

2.  Altered m6A RNA methylation contributes to hippocampal memory deficits in Huntington's disease mice.

Authors:  Silvia Ginés; Verónica Brito; Anika Pupak; Ankita Singh; Anna Sancho-Balsells; Rafael Alcalá-Vida; Marc Espina; Albert Giralt; Eulàlia Martí; Ulf Andersson Vang Ørom
Journal:  Cell Mol Life Sci       Date:  2022-07-11       Impact factor: 9.207

Review 3.  Neuromechanobiology: An Expanding Field Driven by the Force of Greater Focus.

Authors:  Cara T Motz; Victoria Kabat; Tarun Saxena; Ravi V Bellamkonda; Cheng Zhu
Journal:  Adv Healthc Mater       Date:  2021-08-02       Impact factor: 11.092

Review 4.  Cdc-Like Kinases (CLKs): Biology, Chemical Probes, and Therapeutic Potential.

Authors:  Paula Martín Moyano; Václav Němec; Kamil Paruch
Journal:  Int J Mol Sci       Date:  2020-10-13       Impact factor: 5.923

5.  Epigenetic control of ion channel expression and cell-specific splicing in nociceptors: Chronic pain mechanisms and potential therapeutic targets.

Authors:  Diane Lipscombe; E Javier Lopez-Soto
Journal:  Channels (Austin)       Date:  2021-12       Impact factor: 2.581

6.  Opioid Use Disorder and Alternative mRNA Splicing in Reward Circuitry.

Authors:  Spencer B Huggett; Ami S Ikeda; John E McGeary; Karla R Kaun; Rohan H C Palmer
Journal:  Genes (Basel)       Date:  2022-06-10       Impact factor: 4.141

7.  Cell-specific exon methylation and CTCF binding in neurons regulate calcium ion channel splicing and function.

Authors:  Eduardo Javier López Soto; Diane Lipscombe
Journal:  Elife       Date:  2020-03-26       Impact factor: 8.140

  7 in total

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