Literature DB >> 31602613

Protein-Protein Interaction Profiling in Candida albicans Revealed by Biochemical Purification-Mass Spectrometry (BP/MS).

Reza Pourhaghighi1, Teresa R O'Meara2, Leah E Cowen2, Andrew Emili3,4.   

Abstract

BP/MS is a new experimental proteomic platform for systematic study of native protein complexes and global protein-protein interaction networks based on deep biochemical purification of soluble protein extracts and mass spectrometry identification of coeluting proteins. Herein, we describe the application of this methodology to draft a high-confidence protein interaction network for Candida albicans.

Entities:  

Keywords:  Candida albicans; High-performance liquid chromatography (HPLC); Ion exchange chromatography (IEX); Nano-liquid chromatography–tandem mass spectrometry (nLC-MS/MS); Protein–protein interaction

Mesh：

Substances：

Year:  2019        PMID： 31602613     DOI： 10.1007/978-1-4939-9736-7_12

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  10 in total

1.  Adaptations of Candida albicans for growth in the mammalian intestinal tract.

Authors:  Ari Rosenbach; Daniel Dignard; Jessica V Pierce; Malcolm Whiteway; Carol A Kumamoto
Journal:  Eukaryot Cell       Date:  2010-04-30

2.  A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae.

Authors:  P Uetz; L Giot; G Cagney; T A Mansfield; R S Judson; J R Knight; D Lockshon; V Narayan; M Srinivasan; P Pochart; A Qureshi-Emili; Y Li; B Godwin; D Conover; T Kalbfleisch; G Vijayadamodar; M Yang; M Johnston; S Fields; J M Rothberg
Journal:  Nature       Date:  2000-02-10       Impact factor: 49.962

3.  Drug induced proteome changes in Candida albicans: comparison of the effect of beta(1,3) glucan synthase inhibitors and two triazoles, fluconazole and itraconazole.

Authors:  Jean-Michel Bruneau; Isabelle Maillet; Eric Tagat; Raymond Legrand; Françoise Supatto; Claude Fudali; Jean-Pierre Le Caer; Valérie Labas; Dominique Lecaque; John Hodgson
Journal:  Proteomics       Date:  2003-03       Impact factor: 3.984

4.  A census of human soluble protein complexes.

Authors:  Pierre C Havugimana; G Traver Hart; Tamás Nepusz; Haixuan Yang; Andrei L Turinsky; Zhihua Li; Peggy I Wang; Daniel R Boutz; Vincent Fong; Sadhna Phanse; Mohan Babu; Stephanie A Craig; Pingzhao Hu; Cuihong Wan; James Vlasblom; Vaqaar-un-Nisa Dar; Alexandr Bezginov; Gregory W Clark; Gabriel C Wu; Shoshana J Wodak; Elisabeth R M Tillier; Alberto Paccanaro; Edward M Marcotte; Andrew Emili
Journal:  Cell       Date:  2012-08-31       Impact factor: 41.582

5.  Integrated proteomics and genomics strategies bring new insight into Candida albicans response upon macrophage interaction.

Authors:  Elena Fernández-Arenas; Virginia Cabezón; Clara Bermejo; Javier Arroyo; César Nombela; Rosalía Diez-Orejas; Concha Gil
Journal:  Mol Cell Proteomics       Date:  2006-12-12       Impact factor: 5.911

6.  Proteomic analysis of the oxidative stress response in Candida albicans.

Authors:  Harald Kusch; Susanne Engelmann; Dirk Albrecht; Joachim Morschhäuser; Michael Hecker
Journal:  Proteomics       Date:  2007-03       Impact factor: 3.984

7.  A proteomic analysis of the salt, cadmium and peroxide stress responses in Candida albicans and the role of the Hog1 stress-activated MAPK in regulating the stress-induced proteome.

Authors:  Zhikang Yin; David Stead; Jan Walker; Laura Selway; Deborah A Smith; Alistair J P Brown; Janet Quinn
Journal:  Proteomics       Date:  2009-10       Impact factor: 3.984

8.  Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Authors:  Nevan J Krogan; Gerard Cagney; Haiyuan Yu; Gouqing Zhong; Xinghua Guo; Alexandr Ignatchenko; Joyce Li; Shuye Pu; Nira Datta; Aaron P Tikuisis; Thanuja Punna; José M Peregrín-Alvarez; Michael Shales; Xin Zhang; Michael Davey; Mark D Robinson; Alberto Paccanaro; James E Bray; Anthony Sheung; Bryan Beattie; Dawn P Richards; Veronica Canadien; Atanas Lalev; Frank Mena; Peter Wong; Andrei Starostine; Myra M Canete; James Vlasblom; Samuel Wu; Chris Orsi; Sean R Collins; Shamanta Chandran; Robin Haw; Jennifer J Rilstone; Kiran Gandi; Natalie J Thompson; Gabe Musso; Peter St Onge; Shaun Ghanny; Mandy H Y Lam; Gareth Butland; Amin M Altaf-Ul; Shigehiko Kanaya; Ali Shilatifard; Erin O'Shea; Jonathan S Weissman; C James Ingles; Timothy R Hughes; John Parkinson; Mark Gerstein; Shoshana J Wodak; Andrew Emili; Jack F Greenblatt
Journal:  Nature       Date:  2006-03-22       Impact factor: 49.962

9.  Epidemiology and outcomes of invasive candidiasis due to non-albicans species of Candida in 2,496 patients: data from the Prospective Antifungal Therapy (PATH) registry 2004-2008.

Authors:  Michael A Pfaller; David R Andes; Daniel J Diekema; David L Horn; Annette C Reboli; Coleman Rotstein; Billy Franks; Nkechi E Azie
Journal:  PLoS One       Date:  2014-07-03       Impact factor: 3.240

10.  A high-throughput approach for measuring temporal changes in the interactome.

Authors:  Anders R Kristensen; Joerg Gsponer; Leonard J Foster
Journal:  Nat Methods       Date:  2012-08-05       Impact factor: 28.547
  10 in total

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