Seok Kyu Kang1, Carlos G Vanoye1, Sunita N Misra1,2,3, Dennis M Echevarria1, Jeffrey D Calhoun1, John B O'Connor3, Katarina L Fabre1, Dianalee McKnight4, Laurie Demmer5, Paula Goldenberg6, Lauren E Grote7,8, Isabelle Thiffault8,9,10, Carol Saunders8,9,10, Kevin A Strauss11, Ali Torkamani12, Jasper van der Smagt13, Koen van Gassen13, Robert P Carson14, Jullianne Diaz15, Eyby Leon15, Joseph E Jacher16, Mark C Hannibal16, Jessica Litwin17, Neil R Friedman18, Allison Schreiber18, Bryan Lynch19, Annapurna Poduri20, Eric D Marsh21, Ethan M Goldberg21, John J Millichap2,3,22, Alfred L George1, Jennifer A Kearney1. 1. Departments of Pharmacology, Northwestern University Feinberg School of Medicine, Chicago, IL. 2. Departments of Pediatrics, Northwestern University Feinberg School of Medicine, Chicago, IL. 3. Ann & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL. 4. GeneDX, Gaithersburg, MD. 5. Department of Pediatrics, Atrium Health's Levine Children's Hospital, Charlotte, NC. 6. Medical Genetics, Massachusetts General Hospital for Children, Harvard Medical School, Boston, MA. 7. Division of Clinical Genetics, Children's Mercy Hospital, Kansas City, MO. 8. University of Missouri-Kansas City School of Medicine, Kansas City, MO. 9. Center for Pediatric Genomic Medicine, Children's Mercy Hospital, Kansas City, MO. 10. Department of Pathology and Laboratory Medicine, Children's Mercy Hospital, Kansas City, MO. 11. Clinic for Special Children, Strasburg, PA. 12. Scripps Translational Science Institute and Scripps Research Institute, La Jolla, CA. 13. Department of Genetics, University Medical Center Utrecht, Utrecht, the Netherlands. 14. Monroe Carell Jr Children's Hospital at Vanderbilt, Nashville, TN. 15. Rare Disease Institute, Children's National Medical Center, Washington, DC. 16. Division of Pediatric Genetics, Metabolism, and Genomic Medicine, University of Michigan, Ann Arbor, MI. 17. University of California, San Francisco Benioff Children's Hospital, San Francisco, CA. 18. Cleveland Clinic Children's, Cleveland, OH. 19. Department of Paediatric Neurology and Clinical Neurophysiology, Children's University Hospital, Dublin, Ireland. 20. Epilepsy Genetics Program, Department of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, MA. 21. Division of Child Neurology, Children's Hospital of Philadelphia, Philadelphia, PA. 22. Department of Neurology, Northwestern University Feinberg School of Medicine, Chicago, IL.
Abstract
OBJECTIVE: Pathogenic variants in KCNB1, encoding the voltage-gated potassium channel KV 2.1, are associated with developmental and epileptic encephalopathy (DEE). Previous functional studies on a limited number of KCNB1 variants indicated a range of molecular mechanisms by which variants affect channel function, including loss of voltage sensitivity, loss of ion selectivity, and reduced cell-surface expression. METHODS: We evaluated a series of 17 KCNB1 variants associated with DEE or other neurodevelopmental disorders (NDDs) to rapidly ascertain channel dysfunction using high-throughput functional assays. Specifically, we investigated the biophysical properties and cell-surface expression of variant KV 2.1 channels expressed in heterologous cells using high-throughput automated electrophysiology and immunocytochemistry-flow cytometry. RESULTS: Pathogenic variants exhibited diverse functional defects, including altered current density and shifts in the voltage dependence of activation and/or inactivation, as homotetramers or when coexpressed with wild-type KV 2.1. Quantification of protein expression also identified variants with reduced total KV 2.1 expression or deficient cell-surface expression. INTERPRETATION: Our study establishes a platform for rapid screening of KV 2.1 functional defects caused by KCNB1 variants associated with DEE and other NDDs. This will aid in establishing KCNB1 variant pathogenicity and the mechanism of dysfunction, which will enable targeted strategies for therapeutic intervention based on molecular phenotype. ANN NEUROL 2019;86:899-912.
OBJECTIVE: Pathogenic variants in KCNB1, encoding the voltage-gated potassium channel KV 2.1, are associated with developmental and epileptic encephalopathy (DEE). Previous functional studies on a limited number of KCNB1 variants indicated a range of molecular mechanisms by which variants affect channel function, including loss of voltage sensitivity, loss of ion selectivity, and reduced cell-surface expression. METHODS: We evaluated a series of 17 KCNB1 variants associated with DEE or other neurodevelopmental disorders (NDDs) to rapidly ascertain channel dysfunction using high-throughput functional assays. Specifically, we investigated the biophysical properties and cell-surface expression of variant KV 2.1 channels expressed in heterologous cells using high-throughput automated electrophysiology and immunocytochemistry-flow cytometry. RESULTS: Pathogenic variants exhibited diverse functional defects, including altered current density and shifts in the voltage dependence of activation and/or inactivation, as homotetramers or when coexpressed with wild-type KV 2.1. Quantification of protein expression also identified variants with reduced total KV 2.1 expression or deficient cell-surface expression. INTERPRETATION: Our study establishes a platform for rapid screening of KV 2.1 functional defects caused by KCNB1 variants associated with DEE and other NDDs. This will aid in establishing KCNB1 variant pathogenicity and the mechanism of dysfunction, which will enable targeted strategies for therapeutic intervention based on molecular phenotype. ANN NEUROL 2019;86:899-912.
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