Literature DB >> 31596199

Devosia indica sp. nov., isolated from surface seawater in the Indian Ocean.

Danqiu Lin1, Yizhe Huang1, Yong Chen1, Sidong Zhu1, Jifang Yang1, Jigang Chen1.   

Abstract

A Gram-stain-negative bacterium, designated IO390501T, was isolated from a sea water sample from the Indian Ocean and taxonomically characterized using a polyphasic approach. The strain is phylogenetically close to 'Devosia lucknowensis' L15 and Devosia chinhatensis IPL18T, with 16S rRNA gene sequence similarity of 97.7 and 97.4 %, respectively. The genome of IO390501T has a DNA G+C content of 61.9 mol% for the 3.9 Mb chromosome. Genome-based phylogenetic trees indicated that IO390501T clusters as an independent lineage with 'D. lucknowensis' L15. Genomic relatedness of in silico DNA-DNA hybridization between IO390501T and phylogenetic neighbours ranged from 18.8 to 21.5 %, below the cutoff of 70 %, and corresponding average nucleotide identity values were between 71.4 and 79.0 %, lower than the 95.0 % threshold. The predominant cellular fatty acids of IO390501T are summed feature 8 (C18 : 1ω7c/C18  : 1ω6c) and C16  :  0. IO390501T contains ubiquinone-10 as the sole respiratory quinone, and phosphatidylglycerol and glycolipids as the major polar lipids. On the basis of the results of phenotypic, chemotaxonomic and genetic analyses, strain IO390501T represents a novel species of the genus Devosia for which the name Devosia indica sp. nov. is proposed. The type strain is IO390501T.

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Keywords:  Devosia; average nucleotide identity; in silico DNA–DNA hybridization; polyphasic taxonomic approach; up-to-date bacterial core gene

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Year:  2020        PMID: 31596199     DOI: 10.1099/ijsem.0.003759

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

1.  Devosia aurantiaca sp. nov., Isolated from Mountain Soil and Proposal of Albitalea gen. nov. to Replace the Illegitimate Prokaryotic Genus Name Geomonas Khan et al. 2020.

Authors:  Shehzad Abid Khan; Hyung Min Kim; Byung Hee Chun; Che Ok Jeon
Journal:  Curr Microbiol       Date:  2021-05-07       Impact factor: 2.188

2.  Devosia litorisediminis sp. nov., isolated from a sand dune.

Authors:  Sooyeon Park; Min Ju Seo; Wonyong Kim; Jung-Hoon Yoon
Journal:  Arch Microbiol       Date:  2022-09-15       Impact factor: 2.667

  2 in total

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