Literature DB >> 31595631

Homology modeling and docking study of diamondback moth ryanodine receptor reveals the mechanisms for channel activation, insecticide binding and resistance.

Lianyun Lin1, Zhiyuan Hao1, Peng Cao2, Zhiguang Yuchi1.   

Abstract

BACKGROUND: Diamide insecticides, including phthalic and anthranilic diamides, target insect ryanodine receptors (RyRs) and cause misregulation of calcium signaling in insect muscles and neurons. Several resistance mutations have been reported to reduce the efficacy of the diamides, but the exact binding sites and mechanism of resistance mutations are not clear.
RESULTS: The recent breakthrough in structural studies of mammalian RyRs has deepened our understanding of these giant calcium-release channels, but structural information about insect RyRs is still scarce. The only reported high-resolution structure is from the N-terminal domain of diamondback moth (DBM) RyR determined by our group. Here, we generate several homology models of full-length DBM RyR representing different functional states and dock the diamide insecticides into the structural models using Schrodinger software. These models reveal the specific structural features, activation mechanism, structural difference between functional states, ligand-binding sites and insecticide-binding sites of DBM RyR. By comparing the structures of wild-type and insecticide-resistant mutants, we propose a model depicting how the mutations affect the insecticide binding. We also identify the key difference between mammalian and insect RyRs that may explain the species-specific binding properties of diamides.
CONCLUSION: The binding sites for three activators Ca2+ , ATP and caffeine, and regulator ryanodine are conserved in insect and mammalian RyRs, but the binding site for diamide insecticides is species-specific. The phthalic and anthranilic diamides have distinct binding properties in DBM, which can be interfered by resistance mutations located in the transmembrane region.
© 2019 Society of Chemical Industry. © 2019 Society of Chemical Industry.

Entities:  

Keywords:  diamide insecticide; diamondback moth; homology model; molecular docking; resistance; ryanodine receptor

Year:  2019        PMID: 31595631     DOI: 10.1002/ps.5640

Source DB:  PubMed          Journal:  Pest Manag Sci        ISSN: 1526-498X            Impact factor:   4.845


  4 in total

Review 1.  A review of physiological resistance to insecticide stress in Nilaparvata lugens.

Authors:  Bin Tang; Kangkang Xu; Yongkang Liu; Zhongshi Zhou; Sengodan Karthi; Hong Yang; Can Li
Journal:  3 Biotech       Date:  2022-02-28       Impact factor: 2.406

Review 2.  Extraction and determination of flubendiamide insecticide in food samples: A review.

Authors:  S Aghris; O Tahiri Alaoui; F Laghrib; A Farahi; M Bakasse; S Saqrane; S Lahrich; M A El Mhammedi
Journal:  Curr Res Food Sci       Date:  2022-02-14

3.  A mechanism-based approach unveils metabolic routes potentially mediating chlorantraniliprole synergism in honey bees, Apis mellifera L., by azole fungicides.

Authors:  Julian Haas; Johannes Glaubitz; Udo Koenig; Ralf Nauen
Journal:  Pest Manag Sci       Date:  2021-11-19       Impact factor: 4.462

4.  Geographic Monitoring of Insecticide Resistance Mutations in Native and Invasive Populations of the Fall Armyworm.

Authors:  Sudeeptha Yainna; Nicolas Nègre; Pierre J Silvie; Thierry Brévault; Wee Tek Tay; Karl Gordon; Emmanuelle dAlençon; Thomas Walsh; Kiwoong Nam
Journal:  Insects       Date:  2021-05-18       Impact factor: 2.769

  4 in total

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