Literature DB >> 31584172

Plasmid Typing and Classification.

Laura Villa1, Alessandra Carattoli2.   

Abstract

Plasmids identification and classification is an essential parameter in current bacterial typing. The most widely used PCR-based methods are the PCR-based replicon typing (PBRT) and the degenerate primer MOB typing (DPMT). PBRT targets the replicons on the plasmids and DPMT targets the relaxase genes. A finer resolution of phylogenetic relatedness can be obtained by plasmid multiLocus sequence typing available for the major plasmid types occurring in Enterobacteriaceae.

Entities:  

Keywords:  Bacterial typing; DPMT; Incompatibility group; PBRT; pMLST

Mesh:

Year:  2020        PMID: 31584172     DOI: 10.1007/978-1-4939-9877-7_22

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  5 in total

1.  Carbapenem-resistant IMP-1-producing Pseudocitrobacter vendiensis emerging in a hemodialysis unit.

Authors:  Letícia Kellen de Andrade; Arturo Levican; Louise Cerdeira; Andressa Batista Zequini de Morais; Melissa Maia Braz; Evelin Rodrigues Martins; Tiago Casella; Quézia Moura; Bruna Fuga; Nilton Lincopan; Mara Corrêa Lelles Nogueira
Journal:  Braz J Microbiol       Date:  2022-01-15       Impact factor: 2.476

2.  Atypical integrative element with strand-biased circularization activity assists interspecies antimicrobial resistance gene transfer from Vibrio alfacsensis.

Authors:  Lisa Nonaka; Michiaki Masuda; Hirokazu Yano
Journal:  PLoS One       Date:  2022-08-02       Impact factor: 3.752

3.  Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing.

Authors:  Ekaterina Avershina; Stephan A Frye; Jawad Ali; Arne M Taxt; Rafi Ahmad
Journal:  Front Microbiol       Date:  2022-03-17       Impact factor: 5.640

4.  Identity of blaCTX-M Carrying Plasmids in Sequential ESBL-E. coli Isolates from Patients with Recurrent Urinary Tract Infections.

Authors:  Nahid Karami; Sriram Kk; Shora Yazdanshenas; Yii-Lih Lin; Daniel Jaén-Luchoro; Elina Ekedahl; Sanjana Parameshwaran; Anna Lindblom; Christina Åhrén; Fredrik Westerlund
Journal:  Microorganisms       Date:  2021-05-25

5.  The higBA-Type Toxin-Antitoxin System in IncC Plasmids Is a Mobilizable Ciprofloxacin-Inducible System.

Authors:  Qin Qi; Muhammad Kamruzzaman; Jonathan R Iredell
Journal:  mSphere       Date:  2021-06-02       Impact factor: 4.389

  5 in total

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