Literature DB >> 31584078

Genus for biomolecules.

Paweł Rubach1,2, Sebastian Zajac2, Borys Jastrzebski1, Joanna I Sulkowska1,3, Piotr Sułkowski4,5.   

Abstract

The 'Genus for biomolecules' database (http://genus.fuw.edu.pl) collects information about topological structure and complexity of proteins and RNA chains, which is captured by the genus of a given chain and its subchains. For each biomolecule, this information is shown in the form of a genus trace plot, as well as a genus matrix diagram. We assemble such information for all and RNA structures deposited in the Protein Data Bank (PDB). This database presents also various statistics and extensive information about the biological function of the analyzed biomolecules. The database is regularly self-updating, once new structures are deposited in the PDB. Moreover, users can analyze their own structures.
© The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research.

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Year:  2020        PMID： 31584078      PMCID： PMC6943057          DOI： 10.1093/nar/gkz845

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


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