Literature DB >> 31578471

Widening of the genetic and clinical spectrum of Lamb-Shaffer syndrome, a neurodevelopmental disorder due to SOX5 haploinsufficiency.

Ash Zawerton1, Cyril Mignot2,3, Ashley Sigafoos4, Patrick R Blackburn5, Abdul Haseeb6, Kirsty McWalter7, Shoji Ichikawa8, Caroline Nava2,3, Boris Keren2,3, Perrine Charles3, Isabelle Marey3, Anne-Claude Tabet9,10, Jonathan Levy9, Laurence Perrin9, Andreas Hartmann2,11, Gaetan Lesca12,13, Caroline Schluth-Bolard12,13, Pauline Monin12, Sophie Dupuis-Girod12,14, Maria J Guillen Sacoto7, Rhonda E Schnur7, Zehua Zhu7, Alice Poisson15, Salima El Chehadeh16, Yves Alembik16, Ange-Line Bruel17,18, Daphné Lehalle17,19, Sophie Nambot17,19, Sébastien Moutton17,19, Sylvie Odent20,21, Sylvie Jaillard22, Christèle Dubourg21,23, Yvonne Hilhorst-Hofstee24, Tina Barbaro-Dieber25, Lucia Ortega25, Elizabeth J Bhoj26, Diane Masser-Frye27, Lynne M Bird27,28, Kristin Lindstrom29, Keri M Ramsey30, Vinodh Narayanan30, Emily Fassi31, Marcia Willing31, Trevor Cole32, Claire G Salter32,33, Rhoda Akilapa34, Anthony Vandersteen35, Natalie Canham36,37, Patrick Rump38, Erica H Gerkes38, Jolien S Klein Wassink-Ruiter38, Emilia Bijlsma38, Mariëtte J V Hoffer24, Marcelo Vargas39,40, Antonina Wojcik39,40, Florian Cherik41, Christine Francannet41, Jill A Rosenfeld42, Keren Machol42, Daryl A Scott42,43, Carlos A Bacino42, Xia Wang42, Gary D Clark44, Marta Bertoli45, Simon Zwolinski45, Rhys H Thomas46,47, Ela Akay47, Richard C Chang48, Rebekah Bressi48, Rossana Sanchez Russo49, Myriam Srour50, Laura Russell51, Anne-Marie E Goyette52, Lucie Dupuis53, Roberto Mendoza-Londono53, Catherine Karimov54, Maries Joseph55, Mathilde Nizon56,57, Benjamin Cogné56,57, Alma Kuechler58, Amélie Piton59,60, Eric W Klee5,61, Véronique Lefebvre62, Karl J Clark4, Christel Depienne63,64,65.   

Abstract

PURPOSE: Lamb-Shaffer syndrome (LAMSHF) is a neurodevelopmental disorder described in just over two dozen patients with heterozygous genetic alterations involving SOX5, a gene encoding a transcription factor regulating cell fate and differentiation in neurogenesis and other discrete developmental processes. The genetic alterations described so far are mainly microdeletions. The present study was aimed at increasing our understanding of LAMSHF, its clinical and genetic spectrum, and the pathophysiological mechanisms involved.
METHODS: Clinical and genetic data were collected through GeneMatcher and clinical or genetic networks for 41 novel patients harboring various types ofSOX5 alterations. Functional consequences of selected substitutions were investigated.
RESULTS: Microdeletions and truncating variants occurred throughout SOX5. In contrast, most missense variants clustered in the pivotal SOX-specific high-mobility-group domain. The latter variants prevented SOX5 from binding DNA and promoting transactivation in vitro, whereas missense variants located outside the high-mobility-group domain did not. Clinical manifestations and severity varied among patients. No clear genotype-phenotype correlations were found, except that missense variants outside the high-mobility-group domain were generally better tolerated.
CONCLUSIONS: This study extends the clinical and genetic spectrum associated with LAMSHF and consolidates evidence that SOX5 haploinsufficiency leads to variable degrees of intellectual disability, language delay, and other clinical features.

Entities:  

Keywords:  autism; developmental delay; epilepsy; intellectual disability; missense variants.

Mesh:

Substances:

Year:  2019        PMID: 31578471      PMCID: PMC9063678          DOI: 10.1038/s41436-019-0657-0

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.864


  40 in total

1.  The transcription factors L-Sox5 and Sox6 are essential for cartilage formation.

Authors:  P Smits; P Li; J Mandel; Z Zhang; J M Deng; R R Behringer; B de Crombrugghe; V Lefebvre
Journal:  Dev Cell       Date:  2001-08       Impact factor: 12.270

Review 2.  SOXopathies: Growing Family of Developmental Disorders Due to SOX Mutations.

Authors:  Marco Angelozzi; Véronique Lefebvre
Journal:  Trends Genet       Date:  2019-07-06       Impact factor: 11.639

3.  Haploinsufficiency of SOX5 at 12p12.1 is associated with developmental delays with prominent language delay, behavior problems, and mild dysmorphic features.

Authors:  Allen N Lamb; Jill A Rosenfeld; Nicholas J Neill; Michael E Talkowski; Ian Blumenthal; Santhosh Girirajan; Debra Keelean-Fuller; Zheng Fan; Jill Pouncey; Cathy Stevens; Loren Mackay-Loder; Deborah Terespolsky; Patricia I Bader; Kenneth Rosenbaum; Stephanie E Vallee; John B Moeschler; Roger Ladda; Susan Sell; Judith Martin; Shawnia Ryan; Marilyn C Jones; Rocio Moran; Amy Shealy; Suneeta Madan-Khetarpal; Juliann McConnell; Urvashi Surti; Andrée Delahaye; Bénédicte Heron-Longe; Eva Pipiras; Brigitte Benzacken; Sandrine Passemard; Alain Verloes; Bertrand Isidor; Cedric Le Caignec; Gwen M Glew; Kent E Opheim; Maria Descartes; Evan E Eichler; Cynthia C Morton; James F Gusella; Roger A Schultz; Blake C Ballif; Lisa G Shaffer
Journal:  Hum Mutat       Date:  2012-04       Impact factor: 4.878

Review 4.  Exome sequencing expands the mechanism of SOX5-associated intellectual disability: A case presentation with review of sox-related disorders.

Authors:  Addie Nesbitt; Elizabeth J Bhoj; Kristin McDonald Gibson; Zhenming Yu; Elizabeth Denenberg; Mahdi Sarmady; Tanya Tischler; Kajia Cao; Holly Dubbs; Elaine H Zackai; Avni Santani
Journal:  Am J Med Genet A       Date:  2015-06-25       Impact factor: 2.802

5.  Revealing the role of phospholipase Cβ3 in the regulation of VEGF-induced vascular permeability.

Authors:  Luke H Hoeppner; Kathryn N Phoenix; Karl J Clark; Resham Bhattacharya; Xun Gong; Tracey E Sciuto; Pawan Vohra; Sandip Suresh; Santanu Bhattacharya; Ann M Dvorak; Stephen C Ekker; Harold F Dvorak; Kevin P Claffey; Debabrata Mukhopadhyay
Journal:  Blood       Date:  2012-06-06       Impact factor: 22.113

6.  DECIPHER: Database of Chromosomal Imbalance and Phenotype in Humans Using Ensembl Resources.

Authors:  Helen V Firth; Shola M Richards; A Paul Bevan; Stephen Clayton; Manuel Corpas; Diana Rajan; Steven Van Vooren; Yves Moreau; Roger M Pettett; Nigel P Carter
Journal:  Am J Hum Genet       Date:  2009-04-02       Impact factor: 11.025

7.  L-Sox5 and Sox6 drive expression of the aggrecan gene in cartilage by securing binding of Sox9 to a far-upstream enhancer.

Authors:  Yu Han; Véronique Lefebvre
Journal:  Mol Cell Biol       Date:  2008-06-16       Impact factor: 4.272

8.  The three SoxC proteins--Sox4, Sox11 and Sox12--exhibit overlapping expression patterns and molecular properties.

Authors:  Peter Dy; Alfredo Penzo-Méndez; Hongzhe Wang; Carlos E Pedraza; Wendy B Macklin; Véronique Lefebvre
Journal:  Nucleic Acids Res       Date:  2008-04-10       Impact factor: 16.971

9.  Multi-nucleotide de novo Mutations in Humans.

Authors:  Søren Besenbacher; Patrick Sulem; Agnar Helgason; Hannes Helgason; Helgi Kristjansson; Aslaug Jonasdottir; Adalbjorg Jonasdottir; Olafur Th Magnusson; Unnur Thorsteinsdottir; Gisli Masson; Augustine Kong; Daniel F Gudbjartsson; Kari Stefansson
Journal:  PLoS Genet       Date:  2016-11-15       Impact factor: 5.917

10.  Analysis of protein-coding genetic variation in 60,706 humans.

Authors:  Monkol Lek; Konrad J Karczewski; Eric V Minikel; Kaitlin E Samocha; Eric Banks; Timothy Fennell; Anne H O'Donnell-Luria; James S Ware; Andrew J Hill; Beryl B Cummings; Taru Tukiainen; Daniel P Birnbaum; Jack A Kosmicki; Laramie E Duncan; Karol Estrada; Fengmei Zhao; James Zou; Emma Pierce-Hoffman; Joanne Berghout; David N Cooper; Nicole Deflaux; Mark DePristo; Ron Do; Jason Flannick; Menachem Fromer; Laura Gauthier; Jackie Goldstein; Namrata Gupta; Daniel Howrigan; Adam Kiezun; Mitja I Kurki; Ami Levy Moonshine; Pradeep Natarajan; Lorena Orozco; Gina M Peloso; Ryan Poplin; Manuel A Rivas; Valentin Ruano-Rubio; Samuel A Rose; Douglas M Ruderfer; Khalid Shakir; Peter D Stenson; Christine Stevens; Brett P Thomas; Grace Tiao; Maria T Tusie-Luna; Ben Weisburd; Hong-Hee Won; Dongmei Yu; David M Altshuler; Diego Ardissino; Michael Boehnke; John Danesh; Stacey Donnelly; Roberto Elosua; Jose C Florez; Stacey B Gabriel; Gad Getz; Stephen J Glatt; Christina M Hultman; Sekar Kathiresan; Markku Laakso; Steven McCarroll; Mark I McCarthy; Dermot McGovern; Ruth McPherson; Benjamin M Neale; Aarno Palotie; Shaun M Purcell; Danish Saleheen; Jeremiah M Scharf; Pamela Sklar; Patrick F Sullivan; Jaakko Tuomilehto; Ming T Tsuang; Hugh C Watkins; James G Wilson; Mark J Daly; Daniel G MacArthur
Journal:  Nature       Date:  2016-08-18       Impact factor: 49.962

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  4 in total

1.  De Novo SOX6 Variants Cause a Neurodevelopmental Syndrome Associated with ADHD, Craniosynostosis, and Osteochondromas.

Authors:  Dara Tolchin; Jessica P Yeager; Priya Prasad; Naghmeh Dorrani; Alvaro Serrano Russi; Julian A Martinez-Agosto; Abdul Haseeb; Marco Angelozzi; G W E Santen; Claudia Ruivenkamp; Saadet Mercimek-Andrews; Christel Depienne; Alma Kuechler; Barbara Mikat; Hermann-Josef Ludecke; Frederic Bilan; Gwenael Le Guyader; Brigitte Gilbert-Dussardier; Boris Keren; Solveig Heide; Damien Haye; Hilde Van Esch; Liesbeth Keldermans; Damara Ortiz; Emily Lancaster; Ian D Krantz; Bryan L Krock; Kieran B Pechter; Alexandre Arkader; Livija Medne; Elizabeth T DeChene; Eduardo Calpena; Giada Melistaccio; Andrew O M Wilkie; Mohnish Suri; Nicola Foulds; Amber Begtrup; Lindsay B Henderson; Cara Forster; Patrick Reed; Marie T McDonald; Allyn McConkie-Rosell; Julien Thevenon; Pauline Le Tanno; Charles Coutton; Anne C H Tsai; Sarah Stewart; Ales Maver; Rudolf Gorazd; Olivier Pichon; Mathilde Nizon; Benjamin Cogné; Bertrand Isidor; Dominique Martin-Coignard; Radka Stoeva; Véronique Lefebvre; Cédric Le Caignec
Journal:  Am J Hum Genet       Date:  2020-05-21       Impact factor: 11.025

Review 2.  Sorting Sox: Diverse Roles for Sox Transcription Factors During Neural Crest and Craniofacial Development.

Authors:  Elizabeth N Schock; Carole LaBonne
Journal:  Front Physiol       Date:  2020-12-08       Impact factor: 4.566

3.  Shared genetic liability between major depressive disorder and osteoarthritis.

Authors:  Fuquan Zhang; Shuquan Rao; Ancha Baranova
Journal:  Bone Joint Res       Date:  2022-01       Impact factor: 5.853

4.  Action detection using a neural network elucidates the genetics of mouse grooming behavior.

Authors:  Brian Q Geuther; Asaf Peer; Hao He; Gautam Sabnis; Vivek M Philip; Vivek Kumar
Journal:  Elife       Date:  2021-03-17       Impact factor: 8.140

  4 in total

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