Literature DB >> 31574210

GATA factor transcriptional activity: Insights from genome-wide binding profiles.

Oriana Romano1, Annarita Miccio2,3.   

Abstract

The members of the GATA family of transcription factors have homologous zinc fingers and bind to similar sequence motifs. Recent advances in genome-wide technologies and the integration of bioinformatics data have led to a better understanding of how GATA factors regulate gene expression; GATA-factor-induced transcriptional and epigenetic changes have now been analyzed at unprecedented levels of detail. Here, we review the results of genome-wide studies of GATA factor occupancy in human and murine cell lines and primary cells (as determined by chromatin immunoprecipitation sequencing), and then discuss the molecular mechanisms underlying the mediation of transcriptional and epigenetic regulation by GATA factors.
© 2019 International Union of Biochemistry and Molecular Biology.

Entities:  

Keywords:  ChIP-seq; GATA factors; gene regulation; genome-wide occupancy

Year:  2019        PMID: 31574210     DOI: 10.1002/iub.2169

Source DB:  PubMed          Journal:  IUBMB Life        ISSN: 1521-6543            Impact factor:   3.885


  5 in total

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Authors:  Sarah E Pierce; Jeffrey M Granja; William J Greenleaf
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4.  Genome-Wide Identification and Functional Characterization of GATA Transcription Factor Gene Family in Alternaria alternata.

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Journal:  J Fungi (Basel)       Date:  2021-11-26

5.  A universal framework for detecting cis-regulatory diversity in DNA regions.

Authors:  Anushua Biswas; Leelavati Narlikar
Journal:  Genome Res       Date:  2021-07-19       Impact factor: 9.043

  5 in total

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