| Literature DB >> 31572535 |
Jingjing Wang1, Yongzhong Ning2, Shu Li3, Yun Wang3, Jinhua Liang3, Chunming Jin3, Hairun Yan3, Yongcun Huang4.
Abstract
Acinetobacter baumannii is an important cause of hospital-acquired, multidrug-resistant (MDR) infections occurring worldwide. Anti-microbial combination regimens may be the only feasible treatment option for affected patients. In the present study, the efficacy of the combined therapy of meropenem with colistin, ampicillin-sulbactam, tazobactam and vancomycin against clinical strains of MDR A. baumannii was determined. Anti-microbial susceptibility testing was performed and resistance genes were characterized by a multiplex polymerase chain reaction (PCR)-reverse line blot assay. The genetic background of New Delhi metallo-β-lactamase 1 (NDM-1) was analysed by primer walking. The presence of NDM-1 was detected using the modified Hodge test and the EDTA-combined disk test. To screen for synergistic drug effects, the fractional inhibitory concentration index was calculated using a checkerboard assay. The results of the PCR as well as the sequence analyses suggested that NDM-1 was located downstream of the ISAba125 element. In addition, a synergistic effect was determined for meropenem + vancomycin, meropenem + tazobactam and meropenem + ampicillin + sulbactam in two strains each, and in four strains for meropenem + colistin. A total of five A. baumannii strains with resistance to numerous antibiotics and carrying numerous resistance genes were identified. In the strains of A. baumannii, the NDM-1 gene was integrated in a transposon structure with a copy of the ISAba125 insertion sequence. However, the genetic background was not identical among the different species and strains. The genetic variability of NDM-1 may facilitate the rapid dissemination of this gene. In conclusion, meropenem may enhance the efficacy of antibiotics in A. baumannii strains with NDM-1-associated MDR. Copyright: © Wang et al.Entities:
Keywords: Acinetobacter baumannii; New Delhi metallo-β-lactamase 1; antimicrobial effect; metallo-β-lactamase; multidrug-resistant
Year: 2019 PMID: 31572535 PMCID: PMC6755477 DOI: 10.3892/etm.2019.7927
Source DB: PubMed Journal: Exp Ther Med ISSN: 1792-0981 Impact factor: 2.447
Primers used for the amplification of selected carbapenemase genes.
| Gene | Primer name | Sequence | Fragment size (bp) |
|---|---|---|---|
| NDM-1 | NDM-1 F | 5′-ATGGAATTGCCCAATATTATGCACCCGG-3′ | 813 |
| NDM-1 R | 5′-TCAGCGCAGCTTGTCGGCCATG-3′ | ||
| VIM-1 and −2 | VIM F | GATGGTGTTTGGTCGCATA | 390 |
| VIM R | CGAATGCGCAGCACCAG | ||
| IMP | MultiIMP F | 5′-TTGACACTCCATTTACDG-3′ | 139 |
| MultiIMP R | 5′-GATYGAGAATTAAGCCACYCT-3′ | ||
| SHV-5/12-like | SHV F | 5′-GCCTTTATCGGCCCTCACTCAAG-3′ | 897 |
| SHV R | 5′-TTAGCGTTGCCAGTGCTCGATCA-3′ | ||
| VEB | VEB F | CATTTCCCGATGCAAAGCGT | 648 |
| VEB R | CGAAGTTTCTTTGGACTCTG | ||
| KPC | KPC F | 5′-TGTCACTGTATCGCCGTC-3′ | 1010 |
| KPC R | 5′-CTCAGTGCTCTACAGAAAACC-3′ | ||
| OXA-10-like | OXA-10 F | 5′-CCACCAAGAAGGTGCCATGA-3′ | 835 |
| OXA-10 R | 5′-GCGACCTTGAGCGACTTGTT-3′ | ||
| CTX-M | CTX-M Gp1 F | 5′-TTAGGAARTGTGCCGCTGYA-3′ | 688 |
| CTX-M Gp1 R | 5′-CGATATCGTTGGTGGTRCCAT-3′ | ||
| TEM | TEM F | 5′-ATAAAATTCTTGAAGACGAAA-3′ | 1079 |
| TEM R | 5′-GACAGTTAGCAATGCTTAATCA-3′ | ||
| OXA-23-like | OXA-23 F | 5′-GATGTGTCATAGTATTCGTCG-3′ | 1067 |
| OXA-23 R | 5′-TCACAACAACTAAAAGCACTG-3′ | ||
| OXA-30-like | OXA-30 F | 5′-GGCACCAGATTCAACTTTCAAG-3′ | 564 |
| OXA-30 R | 5′-GACCCCAAGTTTCCTGTAAGTG-3′ | ||
| DHA | DHA F | 5′-AACTTTCACAGGTGTGCTGGGT-3′ | 405 |
| DHA R | 5′-CCGTACGCATACTGGCTTTGC-3′ | ||
| CMY-2-like | CMY-2 F | 5′-GCTGAGAGCTCATGATGAAAAAATCG-3′ | 1146 |
| CMY-2 R | 5′-GGTACGGATCCTTATTGCAGC-3′ | ||
| armA F | 5′-ATTCTGCCTATCCTAATTGG-3′ | 315 | |
| armA R | 5′-ACCTATACTTTATCGTCGTC-3′ | ||
| rmtC F | 5′-CGAAGAAGTAACAGCCAAAG-3′ | 711 | |
| rmtC R | 5′-ATCCCAACATCTCTCCCACT-3′ | ||
| aac(3)-IIc F | 5′-ACGCGGAAGGCAATAACGGA-3′ | 854 | |
| aac(3)-IIc R | 5′-TAACCTGAAGGCTCGCAAGA-3′ | ||
| aac(6′)-Ib-cr F | 5′-TTGCGATGCTCTATGAGTGGCTA-3′ | 482 | |
| aac(6′)-Ib-cr R | 5′-CTCGAATGCCTGGCGTGTTT-3′ | ||
| 5′-AACGCAGGTCACATTGATACA-3′ | 266 | ||
| 5′-ACCAAGCAGGTTCGCAGTC-3′ | |||
| aacC1 F | 5′-CACCTACTCCCAACATCAGC-3′ | 329 | |
| aacC1 R | 5′-CTTCCCGTATGCCCAACT-3′ | ||
| qnrA F | 5′-ATTTCTCACGCCAGGATTTG-3′ | ||
| qnrA R | 5′-GATCGGCAAAGGTTAGGTCA-3′ | 516 | |
| qnrB F | 5′-ACGATGCCTGGTAGTTGTCC-3′ | 469 | |
| qnrB R | 5′-GATCGTGAAAGCCAGAAAGG-3′ | ||
| qnrS F | 5′-ACGACATTCGTCAACTGCAA-3′ | 417 | |
| qnrS R | 5′-TAAATTGGCACCCTGTAGGC-3′ |
F, forward; R, reverse; NDM-1, New Delhi metallo-β-lactamase 1; bla, β-lactamase.
MIC values of NDM-1-producing and colistin-resistant A. baumannii strains.
| MIC (µg/ml) | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Isolate | Resistance genes | MLST | Sample type | TZP | CST | SAM, ampicillin/sulbactam | TGC | AMK | AZM | ATM | CAZ | MEM | RIF | SXT, trimethoprim/sulfamethoxazole | VAN | TEC | CEP |
| 1 | ST191 | Blood | 8 | 8 | 64/32 | 8 | 256 | 128 | 64 | 64 | 128 | 4 | 64/1216 | 64 | 128 | 1024 | |
| 2 | ST191 | Blood | 128 | 8 | 32/16 | 8 | 128 | 64 | 64 | 64 | 32 | 4 | 32/1216 | 32 | 128 | 512 | |
| 3 | ST357 | Cerebrospinal fluid | 32 | 4 | 128/64 | 4 | 32 | 64 | 128 | 32 | 64 | 8 | 64/608 | 32 | 256 | 512 | |
| 4 | ST357 | Urine | 32 | 8 | 64/32 | 16 | 32 | 32 | 32 | 128 | 32 | 8 | 32/608 | 64 | 512 | 256 | |
| 5 | ST191 | Cerebrospinal fluid | 16 | 8 | 32/16 | 32 | 128 | 64 | 32 | 64 | 128 | 4 | 128/608 | 128 | 256 | 1024 | |
MIC, minimum inhibitory concentration; CST, colistin; SAM, ampicillin-sulbactam; TGC, tigecycline; AMK, amikacin; AZM, azithromycin; ATM, aztreonam; CAZ, ceftazidime; MEM, meropenem; RIF, rifampin; SXT, trimethoprim-sulfamethoxazole; VAN, vancomycin; TEC, teicoplanin; CEP, cephalothin; TZP, tazobactam; NDM-1, New Delhi metallo-β-lactamase 1; ST, sequence type.
Figure 1.Comparison of the blaNDM-1 gene environments identified in the present study. The area highlighted in light blue indicates the homologous regions around the NDM-1 gene in the five strains. The arrows indicate the transcriptional direction of genes. NDM-1, New Delhi metallo-β-lactamase 1.
Results of the checkerboard synergy test of A. baumannii harboring New Delhi metallo-β-lactamase 1.
| Meropenem + vancomycin | Meropenem + ampicillin-sulbactam | Meropenem + tazobactam | Meropenem + colistin | |||||
|---|---|---|---|---|---|---|---|---|
| Isolate | FICI | Result | FICI | Result | FICI | Result | FICI | Result |
| 0.25 | Synergism | 0.5 | Synergism | 0.37 | Synergism | 0.26 | Synergism | |
| 1 | 0.310 | Synergism | 0.265 | Synergism | 1.25 | Indifference | 1.25 | Indifference |
| 2 | 0.750 | Indifference | 0.532 | Indifference | 0.281 | Synergism | 0.281 | Synergism |
| 3 | 0.562 | Indifference | 1.301 | Indifference | 0.375 | Synergism | 0.375 | Synergism |
| 4 | 0.257 | Synergism | 1.057 | Indifference | 1.642 | Indifference | 0.281 | Synergism |
| 5 | 0.255 | Indifference | 0.124 | Synergism | 2.000 | Indifference | 0.140 | Synergism |
FICI, fractional inhibitory concentration index; ATCC, American Type Culture Collection.
Figure 2.Time-kill curves of two strains of Acinetobacter baumannii treated with MEM (16 mg/l), CST [4 mg/l (0.5×MIC) or 8 mg/l (MIC)] or their combination. (A) Time-kill curves of the second strain; (B) Time-kill curves of the fourth strain; (C and D) Number of viable cells in (C) the second strain and (D) the fourth strain with different antibiotic treatments after 48 h of cultivation. ***P<0.001. MIC, maximum inhibitory concentration; CST, colistin; CFU, colony-forming units; MEM, meropenem.