Literature DB >> 31570835

A Pandas complex adapted for piRNA-guided transcriptional silencing and heterochromatin formation.

Kang Zhao1,2, Sha Cheng2,3, Na Miao1,2, Ping Xu1,4, Xiaohua Lu1,2, Yuhan Zhang3,5, Ming Wang1, Xuan Ouyang1,2, Xun Yuan2,3, Weiwei Liu1, Xin Lu1,2, Peng Zhou1,2, Jiaqi Gu1,5, Yiqun Zhang1, Ding Qiu1,2, Zhaohui Jin2,3, Chen Su6, Chao Peng6, Jian-Hua Wang7, Meng-Qiu Dong8,9, Youzhong Wan4, Jinbiao Ma5, Hong Cheng2,3, Ying Huang10,11,12, Yang Yu13,14.   

Abstract

The repression of transposons by the Piwi-interacting RNA (piRNA) pathway is essential to protect animal germ cells. In Drosophila, Panoramix enforces transcriptional silencing by binding to the target-engaged Piwi-piRNA complex, although the precise mechanisms by which this occurs remain elusive. Here, we show that Panoramix functions together with a germline-specific paralogue of a nuclear export factor, dNxf2, and its cofactor dNxt1 (p15), to suppress transposon expression. The transposon RNA-binding protein dNxf2 is required for animal fertility and Panoramix-mediated silencing. Transient tethering of dNxf2 to nascent transcripts leads to their nuclear retention. The NTF2 domain of dNxf2 competes dNxf1 (TAP) off nucleoporins, a process required for proper RNA export. Thus, dNxf2 functions in a Panoramix-dNxf2-dependent TAP/p15 silencing (Pandas) complex that counteracts the canonical RNA exporting machinery and restricts transposons to the nuclear peripheries. Our findings may have broader implications for understanding how RNA metabolism modulates heterochromatin formation.

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Year:  2019        PMID: 31570835     DOI: 10.1038/s41556-019-0396-0

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  20 in total

1.  Panoramix SUMOylation on chromatin connects the piRNA pathway to the cellular heterochromatin machinery.

Authors:  Veselin I Andreev; Changwei Yu; Juncheng Wang; Jakob Schnabl; Laszlo Tirian; Maja Gehre; Dominik Handler; Peter Duchek; Maria Novatchkova; Lisa Baumgartner; Katharina Meixner; Grzegorz Sienski; Dinshaw J Patel; Julius Brennecke
Journal:  Nat Struct Mol Biol       Date:  2022-02-16       Impact factor: 15.369

2.  HIV-1 Tat and cocaine coexposure impacts piRNAs to affect astrocyte energy metabolism.

Authors:  Mayur Doke; Fatah Kashanchi; Mansoor A Khan; Thangavel Samikkannu
Journal:  Epigenomics       Date:  2022-02-16       Impact factor: 4.778

3.  Accurate quantification of 3'-terminal 2'-O-methylated small RNAs by utilizing oxidative deep sequencing and stem-loop RT-qPCR.

Authors:  Yan Kong; Huanhuan Hu; Yangyang Shan; Zhen Zhou; Ke Zen; Yulu Sun; Rong Yang; Zheng Fu; Xi Chen
Journal:  Front Med       Date:  2022-04-13       Impact factor: 4.592

Review 4.  Emerging roles and functional mechanisms of PIWI-interacting RNAs.

Authors:  Xin Wang; Anne Ramat; Martine Simonelig; Mo-Fang Liu
Journal:  Nat Rev Mol Cell Biol       Date:  2022-09-14       Impact factor: 113.915

5.  Deciphering cellular heterogeneity of pancreatic tumours.

Authors:  Xiphias Ge Zhu; Kivanc Birsoy
Journal:  Nat Cell Biol       Date:  2019-11       Impact factor: 28.824

6.  Complex Genetic Interactions between Piwi and HP1a in the Repression of Transposable Elements and Tissue-Specific Genes in the Ovarian Germline.

Authors:  Artem A Ilyin; Anastasia D Stolyarenko; Nikolay Zenkin; Mikhail S Klenov
Journal:  Int J Mol Sci       Date:  2021-12-14       Impact factor: 5.923

7.  The Mi-2 nucleosome remodeler and the Rpd3 histone deacetylase are involved in piRNA-guided heterochromatin formation.

Authors:  Bruno Mugat; Simon Nicot; Carolina Varela-Chavez; Christophe Jourdan; Kaoru Sato; Eugenia Basyuk; François Juge; Mikiko C Siomi; Alain Pélisson; Séverine Chambeyron
Journal:  Nat Commun       Date:  2020-06-04       Impact factor: 14.919

8.  Crystal structure of Drosophila Piwi.

Authors:  Sonomi Yamaguchi; Akira Oe; Kazumichi M Nishida; Keitaro Yamashita; Asako Kajiya; Seiichi Hirano; Naoki Matsumoto; Naoshi Dohmae; Ryuichiro Ishitani; Kuniaki Saito; Haruhiko Siomi; Hiroshi Nishimasu; Mikiko C Siomi; Osamu Nureki
Journal:  Nat Commun       Date:  2020-02-12       Impact factor: 14.919

Review 9.  The piRNA pathway in Drosophila ovarian germ and somatic cells.

Authors:  Kaoru Sato; Mikiko C Siomi
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2020       Impact factor: 3.493

Review 10.  Jump around: transposons in and out of the laboratory.

Authors:  Anuj Kumar
Journal:  F1000Res       Date:  2020-02-24
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