Literature DB >> 31563844

The roles of fission yeast exonuclease 5 in nuclear and mitochondrial genome stability.

Justin L Sparks1, Kimberly J Gerik2, Carrie M Stith2, Bonita L Yoder2, Peter M Burgers3.   

Abstract

The Exo5 family consists of bi-directional, single-stranded DNA-specific exonucleases that contain an iron-sulfur cluster as a structural motif and have multiple roles in DNA metabolism. S. cerevisiae Exo5 is essential for mitochondrial genome maintenance, while the human ortholog is important for nuclear genome stability and DNA repair. Here, we identify the Exo5 ortholog in Schizosaccharomyes pombe (spExo5). The activity of spExo5 is highly similar to that of the human enzyme. When the single-stranded DNA is coated with single-stranded DNA binding protein RPA, spExo5 become a 5'-specific exonuclease. Exo5Δ mutants are sensitive to various DNA damaging agents, particularly interstrand crosslinking agents. An epistasis analysis places exo5+ in the Fanconi pathway for interstrand crosslink repair. Exo5+ is in a redundant pathway with rad2+, which encodes the flap endonuclease FEN1, for mitochondrial genome maintenance. Deletion of both genes lead to severe depletion of the mitochondrial genome, and defects in respiration, indicating that either spExo5 or spFEN1 is necessary for mitochondrial DNA metabolism.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Exo5; Exonuclease; Fission yeast; Interstrand crosslink repair; Mitochondrial replication

Mesh:

Substances:

Year:  2019        PMID: 31563844      PMCID: PMC6990415          DOI: 10.1016/j.dnarep.2019.102720

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  37 in total

1.  Nuclear mutations in the petite-negative yeast Schizosaccharomyces pombe allow growth of cells lacking mitochondrial DNA.

Authors:  P Haffter; T D Fox
Journal:  Genetics       Date:  1992-06       Impact factor: 4.562

2.  Psoralen monoadducts and interstrand cross-links in DNA.

Authors:  R S Cole
Journal:  Biochim Biophys Acta       Date:  1971-11-29

3.  Comparison of Schizosaccharomyces pombe expression systems.

Authors:  S L Forsburg
Journal:  Nucleic Acids Res       Date:  1993-06-25       Impact factor: 16.971

4.  Okazaki fragment maturation in yeast. I. Distribution of functions between FEN1 AND DNA2.

Authors:  Rao Ayyagari; Xavier V Gomes; Dmitry A Gordenin; Peter M J Burgers
Journal:  J Biol Chem       Date:  2002-11-06       Impact factor: 5.157

5.  Yeast exonuclease 5 is essential for mitochondrial genome maintenance.

Authors:  Peter M Burgers; Carrie M Stith; Bonita L Yoder; Justin L Sparks
Journal:  Mol Cell Biol       Date:  2010-01-19       Impact factor: 4.272

6.  Removal of oxidative DNA damage via FEN1-dependent long-patch base excision repair in human cell mitochondria.

Authors:  Pingfang Liu; Limin Qian; Jung-Suk Sung; Nadja C de Souza-Pinto; Li Zheng; Daniel F Bogenhagen; Vilhelm A Bohr; David M Wilson; Binghui Shen; Bruce Demple
Journal:  Mol Cell Biol       Date:  2008-06-09       Impact factor: 4.272

7.  Cross talk between the nuclease and helicase activities of Dna2: role of an essential iron-sulfur cluster domain.

Authors:  Subhash Pokharel; Judith L Campbell
Journal:  Nucleic Acids Res       Date:  2012-06-07       Impact factor: 16.971

8.  A cryptic targeting signal creates a mitochondrial FEN1 isoform with tailed R-Loop binding properties.

Authors:  Lawrence Kazak; Aurelio Reyes; Jiuya He; Stuart R Wood; Gloria Brea-Calvo; Torgeir T Holen; Ian J Holt
Journal:  PLoS One       Date:  2013-05-13       Impact factor: 3.240

9.  The FANCM ortholog Fml1 promotes recombination at stalled replication forks and limits crossing over during DNA double-strand break repair.

Authors:  Weili Sun; Saikat Nandi; Fekret Osman; Jong Sook Ahn; Jovana Jakovleska; Alexander Lorenz; Matthew C Whitby
Journal:  Mol Cell       Date:  2008-10-10       Impact factor: 17.970

10.  Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas.

Authors:  Theo A Knijnenburg; Linghua Wang; Michael T Zimmermann; Nyasha Chambwe; Galen F Gao; Andrew D Cherniack; Huihui Fan; Hui Shen; Gregory P Way; Casey S Greene; Yuexin Liu; Rehan Akbani; Bin Feng; Lawrence A Donehower; Chase Miller; Yang Shen; Mostafa Karimi; Haoran Chen; Pora Kim; Peilin Jia; Eve Shinbrot; Shaojun Zhang; Jianfang Liu; Hai Hu; Matthew H Bailey; Christina Yau; Denise Wolf; Zhongming Zhao; John N Weinstein; Lei Li; Li Ding; Gordon B Mills; Peter W Laird; David A Wheeler; Ilya Shmulevich; Raymond J Monnat; Yonghong Xiao; Chen Wang
Journal:  Cell Rep       Date:  2018-04-03       Impact factor: 9.423

View more
  1 in total

1.  EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart.

Authors:  Shashank Hambarde; Chi-Lin Tsai; Raj K Pandita; Albino Bacolla; Anirban Maitra; Vijay Charaka; Clayton R Hunt; Rakesh Kumar; Oliver Limbo; Remy Le Meur; Walter J Chazin; Susan E Tsutakawa; Paul Russell; Katharina Schlacher; Tej K Pandita; John A Tainer
Journal:  Mol Cell       Date:  2021-06-30       Impact factor: 19.328

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.