Literature DB >> 31557726

Circadian clock genes and the transcriptional architecture of the clock mechanism.

Kimberly H Cox1, Joseph S Takahashi1,2.   

Abstract

The mammalian circadian clock has evolved as an adaptation to the 24-h light/darkness cycle on earth. Maintaining cellular activities in synchrony with the activities of the organism (such as eating and sleeping) helps different tissue and organ systems coordinate and optimize their performance. The full extent of the mechanisms by which cells maintain the clock are still under investigation, but involve a core set of clock genes that regulate large networks of gene transcription both by direct transcriptional activation/repression as well as the recruitment of proteins that modify chromatin states more broadly.

Entities:  

Keywords:  circadian clock; clock genes; mammalian; transcription

Mesh:

Year:  2019        PMID: 31557726      PMCID: PMC6872945          DOI: 10.1530/JME-19-0153

Source DB:  PubMed          Journal:  J Mol Endocrinol        ISSN: 0952-5041            Impact factor:   5.098


  116 in total

Review 1.  Post-translational modifications regulate the ticking of the circadian clock.

Authors:  Monica Gallego; David M Virshup
Journal:  Nat Rev Mol Cell Biol       Date:  2007-02       Impact factor: 94.444

2.  A serum shock induces circadian gene expression in mammalian tissue culture cells.

Authors:  A Balsalobre; F Damiola; U Schibler
Journal:  Cell       Date:  1998-06-12       Impact factor: 41.582

3.  Resetting central and peripheral circadian oscillators in transgenic rats.

Authors:  S Yamazaki; R Numano; M Abe; A Hida; R Takahashi; M Ueda; G D Block; Y Sakaki; M Menaker; H Tei
Journal:  Science       Date:  2000-04-28       Impact factor: 47.728

4.  The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.

Authors:  Yasukazu Nakahata; Milota Kaluzova; Benedetto Grimaldi; Saurabh Sahar; Jun Hirayama; Danica Chen; Leonard P Guarente; Paolo Sassone-Corsi
Journal:  Cell       Date:  2008-07-25       Impact factor: 41.582

5.  SIRT1 regulates circadian clock gene expression through PER2 deacetylation.

Authors:  Gad Asher; David Gatfield; Markus Stratmann; Hans Reinke; Charna Dibner; Florian Kreppel; Raul Mostoslavsky; Frederick W Alt; Ueli Schibler
Journal:  Cell       Date:  2008-07-25       Impact factor: 41.582

6.  Circadian rhythms in drinking behavior and locomotor activity of rats are eliminated by hypothalamic lesions.

Authors:  F K Stephan; I Zucker
Journal:  Proc Natl Acad Sci U S A       Date:  1972-06       Impact factor: 11.205

7.  Rhythmic CLOCK-BMAL1 binding to multiple E-box motifs drives circadian Dbp transcription and chromatin transitions.

Authors:  Jürgen A Ripperger; Ueli Schibler
Journal:  Nat Genet       Date:  2006-02-12       Impact factor: 38.330

8.  The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.

Authors:  Nicolas Preitner; Francesca Damiola; Luis Lopez-Molina; Joszef Zakany; Denis Duboule; Urs Albrecht; Ueli Schibler
Journal:  Cell       Date:  2002-07-26       Impact factor: 41.582

9.  Muscle insulin sensitivity and glucose metabolism are controlled by the intrinsic muscle clock.

Authors:  Kenneth A Dyar; Stefano Ciciliot; Lauren E Wright; Rasmus S Biensø; Guidantonio M Tagliazucchi; Vishal R Patel; Mattia Forcato; Marcia I P Paz; Anders Gudiksen; Francesca Solagna; Mattia Albiero; Irene Moretti; Kristin L Eckel-Mahan; Pierre Baldi; Paolo Sassone-Corsi; Rosario Rizzuto; Silvio Bicciato; Henriette Pilegaard; Bert Blaauw; Stefano Schiaffino
Journal:  Mol Metab       Date:  2013-10-23       Impact factor: 7.422

10.  Long-Range Chromosome Interactions Mediated by Cohesin Shape Circadian Gene Expression.

Authors:  Yichi Xu; Weimin Guo; Ping Li; Yan Zhang; Meng Zhao; Zenghua Fan; Zhihu Zhao; Jun Yan
Journal:  PLoS Genet       Date:  2016-05-02       Impact factor: 5.917

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  66 in total

1.  Bringing the cellular clock into understanding lung disease: it's time, period!

Authors:  Colleen M Bartman; Y S Prakash
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2020-07-08       Impact factor: 5.464

Review 2.  Circadian rhythmicity of body temperature and metabolism.

Authors:  Roberto Refinetti
Journal:  Temperature (Austin)       Date:  2020-04-17

3.  Altered circadian clock gene expression in the sperm of infertile men with asthenozoospermia.

Authors:  Peng Zhang; Chun Li; Yue Gao; Yifu Leng
Journal:  J Assist Reprod Genet       Date:  2022-01-09       Impact factor: 3.412

Review 4.  The Circadian Clocks, Oscillations of Pain-Related Mediators, and Pain.

Authors:  Wenguo Fan; Fang Huang; Yanhao Chu; Hongwen He; Qing Liu; Shilin Jia
Journal:  Cell Mol Neurobiol       Date:  2022-02-18       Impact factor: 5.046

Review 5.  Circadian Rhythms in the Neuronal Network Timing the Luteinizing Hormone Surge.

Authors:  Karen J Tonsfeldt; Pamela L Mellon; Hanne M Hoffmann
Journal:  Endocrinology       Date:  2022-02-01       Impact factor: 4.736

6.  CRY1-CBS binding regulates circadian clock function and metabolism.

Authors:  Sibel Cal-Kayitmazbatir; Eylem Kulkoyluoglu-Cotul; Jacqueline Growe; Christopher P Selby; Seth D Rhoades; Dania Malik; Hasimcan Oner; Hande Asimgil; Lauren J Francey; Aziz Sancar; Warren D Kruger; John B Hogenesch; Aalim Weljie; Ron C Anafi; Ibrahim Halil Kavakli
Journal:  FEBS J       Date:  2020-06-09       Impact factor: 5.542

7.  Growth Hormone Pulses and Liver Gene Expression Are Differentially Regulated by the Circadian Clock Gene Bmal1.

Authors:  Erica L Schoeller; Karen J Tonsfeldt; McKenna Sinkovich; Rujing Shi; Pamela L Mellon
Journal:  Endocrinology       Date:  2021-04-01       Impact factor: 4.736

8.  The sleep and circadian problems of Huntington's disease: when, why and their importance.

Authors:  Z Voysey; S V Fazal; A S Lazar; R A Barker
Journal:  J Neurol       Date:  2020-12-23       Impact factor: 4.849

9.  Diurnal, metabolic and thermogenic alterations in a murine model of accelerated aging.

Authors:  David B Allison; Guang Ren; Rodrigo A Peliciari-Garcia; Sobuj Mia; Graham R McGinnis; Jennifer Davis; Karen L Gamble; Jeong-A Kim; Martin E Young
Journal:  Chronobiol Int       Date:  2020-08-20       Impact factor: 2.877

Review 10.  Circadian Biology in Obstructive Sleep Apnea.

Authors:  Bala S C Koritala; Zachary Conroy; David F Smith
Journal:  Diagnostics (Basel)       Date:  2021-06-13
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