Literature DB >> 31557529

Wikidata: A large-scale collaborative ontological medical database.

Houcemeddine Turki1, Thomas Shafee2, Mohamed Ali Hadj Taieb3, Mohamed Ben Aouicha4, Denny Vrandečić5, Diptanshu Das6, Helmi Hamdi7.   

Abstract

Created in October 2012, Wikidata is a large-scale, human-readable, machine-readable, multilingual, multidisciplinary, centralized, editable, structured, and linked knowledge-base with an increasing diversity of use cases. Here, we raise awareness of the potential use of Wikidata as a useful resource for biomedical data integration and semantic interoperability between biomedical computer systems. We show the data model and characteristics of Wikidata and explain how this database can be automatically processed by users as well as by computer methods and programs. Then, we give an overview of the medical entities and relations provided by the database and how they can be useful for various medical purposes such as clinical decision support.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Biomedical ontology; Medical databases; Multilingual resources; Semantic resources; Wikidata

Year:  2019        PMID: 31557529     DOI: 10.1016/j.jbi.2019.103292

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  6 in total

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Journal:  Res Involv Engagem       Date:  2022-07-19

2.  User-centered design of a web-based crowdsourcing-integrated semantic text annotation tool for building a mental health knowledge base.

Authors:  Xing He; Hansi Zhang; Jiang Bian
Journal:  J Biomed Inform       Date:  2020-09-19       Impact factor: 6.317

3.  A Smart Mobile App to Simplify Medical Documents and Improve Health Literacy: System Design and Feasibility Validation.

Authors:  Rasha Hendawi; Shadi Alian; Juan Li
Journal:  JMIR Form Res       Date:  2022-04-01

4.  Using logical constraints to validate statistical information about disease outbreaks in collaborative knowledge graphs: the case of COVID-19 epidemiology in Wikidata.

Authors:  Houcemeddine Turki; Dariusz Jemielniak; Mohamed A Hadj Taieb; Jose E Labra Gayo; Mohamed Ben Aouicha; Mus'ab Banat; Thomas Shafee; Eric Prud'hommeaux; Tiago Lubiana; Diptanshu Das; Daniel Mietchen
Journal:  PeerJ Comput Sci       Date:  2022-09-29

5.  An Unsupervised Approach to Structuring and Analyzing Repetitive Semantic Structures in Free Text of Electronic Medical Records.

Authors:  Varvara Koshman; Anastasia Funkner; Sergey Kovalchuk
Journal:  J Pers Med       Date:  2022-01-01

6.  Wikidata as a knowledge graph for the life sciences.

Authors:  Andra Waagmeester; Gregory Stupp; Sebastian Burgstaller-Muehlbacher; Benjamin M Good; Malachi Griffith; Obi L Griffith; Kristina Hanspers; Henning Hermjakob; Toby S Hudson; Kevin Hybiske; Sarah M Keating; Magnus Manske; Michael Mayers; Daniel Mietchen; Elvira Mitraka; Alexander R Pico; Timothy Putman; Anders Riutta; Nuria Queralt-Rosinach; Lynn M Schriml; Thomas Shafee; Denise Slenter; Ralf Stephan; Katherine Thornton; Ginger Tsueng; Roger Tu; Sabah Ul-Hasan; Egon Willighagen; Chunlei Wu; Andrew I Su
Journal:  Elife       Date:  2020-03-17       Impact factor: 8.713

  6 in total

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