Literature DB >> 31557528

Adversarial training based lattice LSTM for Chinese clinical named entity recognition.

Shan Zhao1, Zhiping Cai2, Haiwen Chen1, Ye Wang1, Fang Liu3, Anfeng Liu4.   

Abstract

Clinical named entity recognition (CNER), which intends to automatically detect clinical entities in electronic health record (EHR), is a committed step for further clinical text mining. Recently, more and more deep learning models are used to Chinese CNER. However, these models do not make full use of the information in EHR, for these models are either word-based or character-based. In addition, neural models tend to be locally unstable and even tiny perturbation may mislead them. In this paper, we firstly propose a novel adversarial training based lattice LSTM with a conditional random field layer (AT-lattice LSTM-CRF) for Chinese CNER. Lattice LSTM is used to capture richer information in EHR. As a powerful regularization method, AT can be used to improve the robustness of neural models by adding perturbations to the training data. Then, we conduct experiments on the proposed neural model with dataset of CCKS-2017 Task 2. The results show that the proposed model achieves a highly competitive performance (with an F1 score of 89.64%) compared to other prevalent neural models, which can be a reinforced baseline for further research in this field.
Copyright © 2019. Published by Elsevier Inc.

Keywords:  Adversarial training; CRF; Clinical named entity recognition; Lattice LSTM

Year:  2019        PMID: 31557528     DOI: 10.1016/j.jbi.2019.103290

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  1 in total

1.  Influenza, dengue and common cold detection using LSTM with fully connected neural network and keywords selection.

Authors:  Wanchaloem Nadda; Waraporn Boonchieng; Ekkarat Boonchieng
Journal:  BioData Min       Date:  2022-02-14       Impact factor: 2.522

  1 in total

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