Literature DB >> 31554684

A New Family of Small-Molecule CD4-Mimetic Compounds Contacts Highly Conserved Aspartic Acid 368 of HIV-1 gp120 and Mediates Antibody-Dependent Cellular Cytotoxicity.

Shilei Ding1,2, Melissa C Grenier3, William D Tolbert4, Dani Vézina1,2, Rebekah Sherburn4, Jonathan Richard1,2, Jérémie Prévost1,2, Jean-Philippe Chapleau1,2, Gabrielle Gendron-Lepage1, Halima Medjahed1, Cameron Abrams5, Joseph Sodroski6,7,8, Marzena Pazgier4, Amos B Smith9, Andrés Finzi10,2,11.   

Abstract

The HIV-1 envelope glycoprotein (Env) trimer mediates virus entry into cells. The "closed" conformation of Env is resistant to nonneutralizing antibodies (nnAbs). These antibodies mostly recognize occluded epitopes that can be exposed upon binding of CD4 or small-molecule CD4 mimetics (CD4mc). Here, we describe a new family of small molecules that expose Env to nnAbs and sensitize infected cells to antibody-dependent cellular cytotoxicity (ADCC). These compounds have a limited capacity to inhibit virus infection directly but are able to sensitize viral particles to neutralization by otherwise nonneutralizing antibodies. Structural analysis shows that some analogs of this family of CD4mc engage the gp120 Phe43 cavity by contacting the highly conserved D368 residue, making them attractive scaffolds for drug development.IMPORTANCE HIV-1 has evolved multiple strategies to avoid humoral responses. One efficient mechanism is to keep its envelope glycoprotein (Env) in its "closed" conformation. Here, we report on a new family of small molecules that are able to "open up" Env, thus exposing vulnerable epitopes. This new family of molecules binds in the Phe43 cavity and contacts the highly conserved D368 residue. The structural and biological attributes of molecules of this family make them good candidates for drug development.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  ADCC; CD4 mimetics; Env; HIV-1; envelope glycoproteins; neutralization; small-molecule inhibitors

Mesh:

Substances:

Year:  2019        PMID: 31554684      PMCID: PMC6880173          DOI: 10.1128/JVI.01325-19

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  66 in total

1.  MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes.

Authors:  Ian W Davis; Laura Weston Murray; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

2.  The CCP4 suite: programs for protein crystallography.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

3.  CD4-dependent, antibody-sensitive interactions between HIV-1 and its co-receptor CCR-5.

Authors:  A Trkola; T Dragic; J Arthos; J M Binley; W C Olson; G P Allaway; C Cheng-Mayer; J Robinson; P J Maddon; J P Moore
Journal:  Nature       Date:  1996-11-14       Impact factor: 49.962

4.  CC CKR5: a RANTES, MIP-1alpha, MIP-1beta receptor as a fusion cofactor for macrophage-tropic HIV-1.

Authors:  G Alkhatib; C Combadiere; C C Broder; Y Feng; P E Kennedy; P M Murphy; E A Berger
Journal:  Science       Date:  1996-06-28       Impact factor: 47.728

5.  Receptor-ligand requirements for increased NK cell polyfunctional potential in slow progressors infected with HIV-1 coexpressing KIR3DL1*h/*y and HLA-B*57.

Authors:  Philomena Kamya; Salix Boulet; Christos M Tsoukas; Jean-Pierre Routy; Réjean Thomas; Pierre Côté; Mohamed-Rachid Boulassel; Jean-Guy Baril; Colin Kovacs; Stephen A Migueles; Mark Connors; Todd J Suscovich; Christian Brander; Cecile L Tremblay; Nicole Bernard
Journal:  J Virol       Date:  2011-04-06       Impact factor: 5.103

6.  HIV infection affects blood myeloid dendritic cells after successful therapy and despite nonprogressing clinical disease.

Authors:  Julie Fontaine; François Coutlée; Cécile Tremblay; Jean-Pierre Routy; Johanne Poudrier; Michel Roger
Journal:  J Infect Dis       Date:  2009-04-01       Impact factor: 5.226

7.  The highly conserved layer-3 component of the HIV-1 gp120 inner domain is critical for CD4-required conformational transitions.

Authors:  Anik Désormeaux; Mathieu Coutu; Halima Medjahed; Beatriz Pacheco; Alon Herschhorn; Christopher Gu; Shi-Hua Xiang; Youdong Mao; Joseph Sodroski; Andrés Finzi
Journal:  J Virol       Date:  2012-12-19       Impact factor: 5.103

8.  Effects of the I559P gp41 change on the conformation and function of the human immunodeficiency virus (HIV-1) membrane envelope glycoprotein trimer.

Authors:  Nirmin Alsahafi; Olfa Debbeche; Joseph Sodroski; Andrés Finzi
Journal:  PLoS One       Date:  2015-04-07       Impact factor: 3.240

9.  Relative resistance of HIV-1 founder viruses to control by interferon-alpha.

Authors:  Angharad E Fenton-May; Oliver Dibben; Tanja Emmerich; Haitao Ding; Katja Pfafferott; Marlen M Aasa-Chapman; Pierre Pellegrino; Ian Williams; Myron S Cohen; Feng Gao; George M Shaw; Beatrice H Hahn; Christina Ochsenbauer; John C Kappes; Persephone Borrow
Journal:  Retrovirology       Date:  2013-12-03       Impact factor: 4.602

10.  Uninfected Bystander Cells Impact the Measurement of HIV-Specific Antibody-Dependent Cellular Cytotoxicity Responses.

Authors:  Jonathan Richard; Jérémie Prévost; Amy E Baxter; Benjamin von Bredow; Shilei Ding; Halima Medjahed; Gloria G Delgado; Nathalie Brassard; Christina M Stürzel; Frank Kirchhoff; Beatrice H Hahn; Matthew S Parsons; Daniel E Kaufmann; David T Evans; Andrés Finzi
Journal:  mBio       Date:  2018-03-20       Impact factor: 7.867

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  10 in total

1.  Differential Pressures of SERINC5 and IFITM3 on HIV-1 Envelope Glycoprotein over the Course of HIV-1 Infection.

Authors:  Saina Beitari; Qinghua Pan; Andrés Finzi; Chen Liang
Journal:  J Virol       Date:  2020-07-30       Impact factor: 5.103

2.  Stabilizing the HIV-1 envelope glycoprotein State 2A conformation.

Authors:  Dani Vézina; Shang Yu Gong; William D Tolbert; Shilei Ding; Dung Nguyen; Jonathan Richard; Gabrielle Gendron-Lepage; Bruno Melillo; Amos B Smith; Marzena Pazgier; Andrés Finzi
Journal:  J Virol       Date:  2020-12-09       Impact factor: 5.103

3.  Characterization of Human Immunodeficiency Virus (HIV-1) Envelope Glycoprotein Variants Selected for Resistance to a CD4-Mimetic Compound.

Authors:  Saumya Anang; Jonathan Richard; Catherine Bourassa; Guillaume Goyette; Ta-Jung Chiu; Hung-Ching Chen; Amos B Smith; Navid Madani; Andrés Finzi; Joseph Sodroski
Journal:  J Virol       Date:  2022-08-18       Impact factor: 6.549

4.  Opening the HIV envelope: potential of CD4 mimics as multifunctional HIV entry inhibitors.

Authors:  Annemarie Laumaea; Amos B Smith; Joseph Sodroski; Andrés Finzi
Journal:  Curr Opin HIV AIDS       Date:  2020-09       Impact factor: 4.283

5.  Optimization of Small Molecules That Sensitize HIV-1 Infected Cells to Antibody-Dependent Cellular Cytotoxicity.

Authors:  Melissa C Grenier; Shilei Ding; Dani Vézina; Jean-Philippe Chapleau; William D Tolbert; Rebekah Sherburn; Arne Schön; Sambasivarao Somisetti; Cameron F Abrams; Marzena Pazgier; Andrés Finzi; Amos B Smith
Journal:  ACS Med Chem Lett       Date:  2019-11-15       Impact factor: 4.345

Review 6.  The Conformational States of the HIV-1 Envelope Glycoproteins.

Authors:  Qian Wang; Andrés Finzi; Joseph Sodroski
Journal:  Trends Microbiol       Date:  2020-05-14       Impact factor: 17.079

7.  The HIV-1 Env gp120 Inner Domain Shapes the Phe43 Cavity and the CD4 Binding Site.

Authors:  Jérémie Prévost; William D Tolbert; Halima Medjahed; Rebekah T Sherburn; Navid Madani; Daria Zoubchenok; Gabrielle Gendron-Lepage; Althea E Gaffney; Melissa C Grenier; Sharon Kirk; Natasha Vergara; Changze Han; Brendan T Mann; Agnès L Chénine; Adel Ahmed; Irwin Chaiken; Frank Kirchhoff; Beatrice H Hahn; Hillel Haim; Cameron F Abrams; Amos B Smith; Joseph Sodroski; Marzena Pazgier; Andrés Finzi
Journal:  mBio       Date:  2020-05-26       Impact factor: 7.867

8.  HIV-1 Envelope Glycoproteins Proteolytic Cleavage Protects Infected Cells from ADCC Mediated by Plasma from Infected Individuals.

Authors:  Jérémie Prévost; Halima Medjahed; Dani Vézina; Hung-Ching Chen; Beatrice H Hahn; Amos B Smith; Andrés Finzi
Journal:  Viruses       Date:  2021-11-06       Impact factor: 5.818

9.  Neutralizing Antibodies Induced by First-Generation gp41-Stabilized HIV-1 Envelope Trimers and Nanoparticles.

Authors:  Sonu Kumar; Xiaohe Lin; Timothy Ngo; Benjamin Shapero; Cindy Sou; Joel D Allen; Jeffrey Copps; Lei Zhang; Gabriel Ozorowski; Linling He; Max Crispin; Andrew B Ward; Ian A Wilson; Jiang Zhu
Journal:  mBio       Date:  2021-06-22       Impact factor: 7.867

Review 10.  The HIV Env Glycoprotein Conformational States on Cells and Viruses.

Authors:  Connie Zhao; Hongru Li; Talia H Swartz; Benjamin K Chen
Journal:  mBio       Date:  2022-03-24       Impact factor: 7.786

  10 in total

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