MicroRNA‑203a‑3p is a candidate tumor suppressor that targets thrombospondin 2 in colorectal carcinoma.

The aim of the present study was to investigate the role of miR‑203a‑3p in colorectal cancer (CRC) and identify the target gene of microRNA (miR)‑203a‑3p. A total of 59 sets of cancer tissues and corresponding adjacent non‑tumor tissues were collected from CRC patients (aged 31‑78 years) between October 2016 and May 2017. Total RNA extraction and reverse transcription‑quantitative polymerase chain reaction analysis, transfection assay, and Transwell and apoptosis assays, western blot analysis, a luciferase reporter assay and immunohistochemistry were performed. miR‑203a‑3p was found to be significantly downregulated in CRC tissues compared with adjacent normal tissues. The overexpression of miR‑203a‑3p was shown to inhibit the invasion and migration of human CRC SW480 and HT29 cells, and increase their apoptosis rates. Furthermore, miR‑203a‑3p downregulated the expression of thrombospondin 2 (THBS2) in SW480 and HT29 cells. It was also experimentally demonstrated that miR‑203a‑3p binds to the 3'‑untranslated region of THBS2, downregulating THBS2 expression and thereby inhibiting CRC progression and metastasis. The expression of miR‑203a‑3p, which serves a tumor‑suppressive role, in CRC tissues was significantly downregulated. As miR‑203a‑3p was determined to target THBS2 to inhibit CRC progression and metastasis; thus, miR‑203a‑3p may be considered as a potential novel approach to treating CRC.

Introduction

Colorectal cancer (CRC) is the third leading cause of cancer-related mortality worldwide, with ~1.7 million newly diagnosed CRC cases and 800,000 deaths annually (1,2). The most common treatment for CRC is surgery, which has a high success rate when patients are diagnosed early; however, the 5-year overall survival rate remains unsatisfactory, as the majority of CRC patients are diagnosed at an advanced stage. Consequently, identifying novel biomarkers and therapeutic targets in CRC is crucial.

MicroRNAs (miRNAs), which contain 22–24 nucleotides, are small non-coding RNAs that affect a number of physiological events (3), often by binding to the 3′-untranslated region (3′UTR) of target genes, thus inhibiting or causing variations in mRNA transcripts (4–6). The occurrence and progression of several tumor types have been found to be associated with abnormal miRNA expression (7–11). Reportedly, aberrant miRNA-203a-3p expression has been detected in numerous cancers (12–18); however, its role and mechanism of action in CRC remain elusive. Therefore, the present study was conducted to investigate miRNA-203a-3p expression in CRC, and elucidate the mechanism underlying the inhibition of apoptosis and promotion of metastasis in CRC.

THBS2 affects interactions between cells and is a potential tumor suppressor (19–21). Accumulating evidence indicates that THBS2 is associated with CRC (22,23). THBS2, secreted by stromal fibroblasts, endothelial cells and immune cells, and belongs to the THBS family of proteins, was identified in 1991 and its sequence was analyzed in 1997 (24,25). Subsequently, it was found to be associated with various cancer types (22,26–30). The aim of the present study was to investigate the expression of THBS2 in CRC tissues, and determine its link with the overall survival (OS) and disease-free survival (DFS) in patients with CRC. We evaluated the associations among miRNA-203a-3p expression, THBS2 expression and CRC progression, in order to determine whether miRNA-203a-3p and THBS2 may be used as biomarkers and therapeutic targets in patients with CRC.

Materials and methods

Clinical sample collection

We collected 59 sets of cancer tissues and corresponding adjacent non-tumor tissues that were resected from 26 female and 33 male CRC patients (aged 31–78 years) at the Zhejiang Provincial People's Hospital (China) between October 2016 and May 2017. None of the patients received preoperative radiation or chemotherapy. The study protocol was approved by the Ethics Committee of Zhejiang Provincial People's Hospital. Written informed consent was obtained from all patients prior to participation in the study.

Cell culture

The human CRC cell lines HT29, HCT15, SW480 and SW620, and the normal human colon cell line NCM460, were purchased from the Cell Bank of Shanghai Institute of Cell Biology. All the cells were maintained in RPMI-1640 or minimal essential media (MEM; HyClone; GE Healthcare Life Sciences) containing 10% fetal bovine serum (FBS) (Biowest SAS France), and cultured in a 5% CO2 incubator at 37°C. Cells were passaged at 75% confluence with 0.02% EDTA/0.25% trypsin.

Total RNA extraction and reverse transcription-quantitative polymerase chain reaction (RT-qPCR) analysis

Total cell RNA was extracted from fresh specimens and cells with TRIzol® (Invitrogen; Thermo Fisher Scientific, Inc.) in accordance with the manufacturer's instructions. RT was performed with SYBR Premix Ex Taq according to manufacturer's protocols (Takara Bio, Inc.). RNU6B and GAPDH were used as endogenous controls. miRNA-203a-3p was reverse-transcribed using the following stem-loop RT primer: 5′-GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACGTTGAA-3′. qPCR was performed using FastStart Essential DNA Green Master (Roche Diagnostics) with miRNA-specific primers (forward, 5′-GUGAAAUGUUUAGGACCACUAG3′ and reverse, 5′-AGUGGUCCUAAACAUUUCACUU-3′; U6, forward, 5′-ATTGGAACGATACAGAGAAGATT-3′ and reverse, 5′-GGAACGCTTCACGAATTTG-3′). GAPDH, forward, 5′-ATCGTCCACCGCAAATGCTTCTA-3′ and reverse, 5′-AGCCATGCCAATCTCATCTTGTT-3′. THBS2, forward, 5′-CGTGGACAATGACCTTGTTG-3′ and reverse, 5′-GCCATCGTTGTCATCATCAG-3′. The reaction ran on the ABI 7900HT Sequence Detection System (Applied Biosystems; Thermo Fisher Scientific, Inc.) in the presence of SYBR-Green dye (Toyobo Life Science). qPCR was conducted as follows: 95°C for 10 min, 40 cycles at 95°C for 10 sec, 60°C for 30 sec and 72°C for 10 sec. Relative expression levels were calculated using the 2−ΔΔCq method.

Transfection assay

Prior to transfection, cells were plated (3.0×105 cells per well) and cultured at 37°C in 6-well dishes (15×104 cells per well) for 20 h. miRNA-203a-3p mimics (Guangzhou RiboBio Co., Ltd.) were transfected into SW480 cells and HT29 cells, which have a relatively low expression of miRNA-203a-3p compared with the normal colonic cells NCM460 and other CRC cell lines. The negative control group (Guangzhou RiboBio Co., Ltd.) was set up in parallel. Transfection of each siRNA (50 nM) was conducted with Lipofectamine® 3000 (Thermo Fisher Scientific, Inc.) according to the manufacturer's instructions (miR-203a-3p mimic, forward, 5′-GUGAAAUGUUUAGGACCACUAG-3′ and reverse, 5′-AGUGGUCCUAAACAUUUCACUU-3′; scramble miRNA, 5′-CAGUACUUUUGUGUAGUACAA-3′). The cells were collected for the following experiments after 48 h of transfection.

Transwell assay

The CRC cells were cultured for 24 h after transfection. Migration and invasion assays were performed with a Transwell assay kit (Corning, Inc.) and invasion chambers (Corning, Inc.). Transfected cells (6×104/well for migration and 1×105/well for invasion assays) were plated in the upper chamber, which contained FBS-free MEM; the lower chamber contained MEM supplemented with 10% FBS. After 48 h, cells that had migrated or invaded through the membrane were fixed with methanol and stained with 0.1% crystal violet in 5% CO2 at 37°C for 15 min. The cells were photographed under a phase-contrast microscope (Olympus Corporation).

Apoptosis assay

At 24 h after transfection with miRNA- 203a-3p mimics or negative controls, the cells were washed with PBS and fixed with 70% ethanol for >12 h at 4°C. Propidium iodide (PI) staining solution (500 µl) was then added to the centrifuged cells (845 × g, 3 min) at room temperature, followed by incubation for 30 min in the dark at room temperature. Cell apoptosis was analyzed by FACSCalibur flow cytometry (BD Biosciences). The percent of apoptotic cells was obtained from FACSCalibur flow cytometry (BD Biosciences) which was used for further calculation. The Annexin V/PI Apoptosis Detection Kit (Beijing Solarbio Science & Technology, Co., Ltd.) was used to assess apoptosis.

Western blot analysis

At 48 h after transfection, the cells were harvested, washed and lysed with lysis buffer (Nanjing KeyGen Biotech Co., Ltd.). The proteins were were quantified using BCA kit (Beyotime Institute of Biotechnology) and were separated with 12% SDS-PAGE (20 µg/lane), and then transferred to microporous membranes (EMD Millipore). The membranes were blocked with Tris-buffered saline with 3% bovine serum albumin (Solarbio Science & Technology Co., Ltd.) for 1 h at room temperature and incubated with primary antibodies against THBS2 (1:500; PA5-80123; Thermo Fisher Scientific, Inc.) and GAPDH (1:1,000; 10494-1-AP; ProteinTech Group, Inc.) for 1 h at room temperature. The corresponding HRP-conjugated secondary antibody was applied at a 1:2,000 dilution after the primary antibodies. The membranes were evaluated using the Chemi Doc™ XRS+ imaging system (Bio-Rad Laboratories, Inc., Hercules, CA, USA).

Luciferase reporter assay

The Renilla vector was established by Ruibo Biotechnology Co., Ltd. HT29 cells were added to 96-well plates and cultured for 24 h. Renilla was used for normalization. The cells were transfected with THBS2-3′UTR-wild-type (WT) or THBS2-3′UTR-mutant (mut) and miR-203a-3p or miR-control vectors using Lipofectamine 3000. After 48 h, luciferase activity was evaluated by Dual-Luciferase Reporter Assay reagent (Promega Corporation).

Cell proliferation analysis

proliferative ability was detected with A Cell Counting Kit-8 (CCK-8) on the manufacturer's instructions (Dojindo Molecular Technologies, Inc., Kumamoto, Japan). At 24, 48 and 72 h following transfection, 2×103 cells/well were seeded into 96-well plates and 10 µl of CCK-8 solution was added to assess cell viability. The optical density (OD) was measured using a microplate reader (Molecular Devices LLC) at an absorbance of 450 nm.

Immunohistochemistry

The paraffin-embedded tissue specimens were cut into 5-µm sections. After deparaffinization, antigens were retrieved with 0.01 M citrate buffer (pH 6.0) and treated with 3% H2O2 for 10 min at room temperature. The sections were incubated with primary antibody against THBS2 (1:500, PA5-80123; Thermo Fisher Scientific, Inc.) overnight at 4°C and then treated with corresponding HRP-conjugated secondary antibody (1:2,000) for 1 h at room temperature. After dehydration, the sections were each covered with a single slide. Images were captured with the NanoZoomer Digital Pathology 2.0RS (Hamamatsu Photonics K.K.) and analyzed with NDP.view, version 2.7.25 (Hamamatsu Photonics K.K.). Upright microscope was used in these experiments and the magnification is 200 times.

Bioinformation analysis

We predict the target gene of miRNA with TargetScan (version 5.0; http://genes.mit.edu/targetscan). The level of THBS2 mRNA in the adjacent normal colonic mucosal tissues and CRC tissues and the Kaplan-Meier survival curve analysis of THBS2 in CRC patients in The Cancer Genome Atlas (TCGA) were analyzed with GEPIA (http://gepia.cancer-pku.cn/).

Statistical analysis

Statistical analysis was conducted using SPSS software version 22.0 (IBM Corp.). Data were presented as the mean ± standard deviation of experiments repeated in triplicate. Significance between groups was analyzed with a Student's t-test. The correlation between miR-203a-3p and THBS2 expression was examined using Pearson's correlation analysis. Survival analyses were conducted using the Kaplan-Meier method and differences in survival were examined using the log-rank test. P<0.05 was considered to indicate a significant.

Results

miRNA-203a-3p expression in CRC

The expression of microRNA-203a-3p was found to be significantly lower in the four CRC cell lines (SW480, SW620, HCT15 and HT29) compared with that in the NCM460 human colonic mucosal epithelial cell line (Fig. 1A). Among the CRC cell lines, HCT15 exhibited a relatively high level of miRNA-203a-3p expression. The expression of miRNA-203a-3p in 59 paired CRC and adjacent normal colonic mucosal tissues was detected by RT-qPCR, and was observed to be significantly downregulated in CRC tissues compared with paired normal tissues (Fig. 1B and C).

Figure 1.

miR-203a-3p was downregulated in CRC tissues and cell lines. (A) miR-203a-3p was downregulated in CRC cell lines. (B) miR-203a-3p was downregulated in 49/59 CRC tissues. (C) microRNA-203a-3p was downregulated in CRC tissues compared with adjacent normal tissues. **P<0.01 and ***P<0.001 vs. NCM460 cells or N samples. C, cancer; CRC, colorectal cancer; miR, microRNA; N, normal.

miRNA-203-3p affects the invasion and migration potentials of CRC cells

In order to certify the function of miRNA-203a-3p, RT-qPCR was performed to identify the cell lines with lower expression levels of miR-203a-3p. In these cell lines, mimics can effectively activate gene expression. As a result, the HT29 and SW480 cell lines, with lower expression of miRNA-203a-3p (Fig. 1), were employed for subsequent analysis. The numbers of SW480 and HT29 cells that invaded and migrated across the Transwell membrane were significantly lower for those transfected with miRNA-203a-3p mimic compared with the negative control group (Fig. 2). These data indicate that miRNA-203a-3p affects the invasion and migration potentials of CRC cells.

Figure 2.

Overexpression of miR-203a-3p can inhibit the invasion and migration of colorectal cancer cells. (A) Reverse transcription-quantitative polymerase chain reaction analysis for evaluation of miR-769 expression in HT29 and SW480 cells transfected with miR-203a-3p mimics or miR-NC. (B) Transwell assay was performed for the analysis of cell invasion and migration. All data were obtained from three independent experiments and presented as mean ± standard deviation. Magnification, ×200; **P<0.01 and ***P<0.001 vs. miR-NC. miR, microRNA; NC, negative control.

miRNA-203a-3p affects the apoptosis of CRC cells

miRNA-203a-3p overexpression in HT29 cells was shown to significantly reduce proliferation compared with the control (Fig. 3A). To further investigate the role of miRNA-203a-3p in CRC, HT29 cells were transfected with miRNA-203a-3p mimics. Flow cytometry analysis indicated a significant increase in the apoptotic rate of HT29 cells transfected with miRNA-203a-3p mimics than the control (Fig. 3B).

Figure 3.

Overexpression of miR-203a-3p can inhibit the proliferation of CRC cells. (A) A Cell Counting Kit-8 assay was used to analyze the proliferation of CRC cells. (B) Cell apoptosis was evaluated by flow cytometry. *P<0.05, **P<0.01 vs. miR-203-NC. CRC, colorectal cancer; FITC, fluorescein isothiocyanate; miR, microRNA; NC, negative control; OD, optical density.

THBS2 expression in CRC tissues

The protein expression of THBS2 in CRC tissues and paired adjacent normal tissues was detected by immunohistochemical staining, and was found to be notably upregulated in CRC tissues compared with that in the adjacent tissues (Fig. 4A). Furthermore, the mRNA levels of THBS2 in CRC tissues was significantly higher compared with that in the adjacent normal colonic mucosal tissues in TCGA (Fig. 4B). Kaplan-Meier survival curve analysis demonstrated that the OS and DFS of CRC patients with higher THBS2 expression were significantly shorter compared with those of patients with lower THBS2 levels in TCGA (log-rank test, P<0.05; Fig. 4C).

Figure 4.

THBS2 is upregulated in CRC tissues and is negatively associated with the prognosis of CRC patients. (A) Immunohistochemistry (magnifications, ×200 and ×400). (B) Relative THBS2 expression in CRC tissues and adjacent normal tissues in TCGA. (C) Kaplan-Meier survival analysis (overall and disease-free survival rates) based on THBS2 expression levels in CRC tissues in TCGA. *P<0.05. CRC, colorectal cancer; COAD, colonic adenocarcinoma; HR, hazard ratio; TCGA, The Cancer Genome Atlas; THBS2, thrombospondin 2.

miR-203a-3p suppresses tumor growth and metastasis by epithelial-to-mesenchymal transition and upregulates the expression of Bcl-2-associated X protein (BAX)

From western blot analysis, it was determined that HT29 cells transfected with miR-203a-3p exhibited significantly higher expression levels of E-cadherin, and BAX and lower expression of N-cadherin and vimentin compared with the control (Fig. 5).

Figure 5.

Overexpression of miR-203a-3p can upregulate E-cadherin and Bax, but downregulates vimentin and N-cadherin in HT29 cells. Western blotting was used to determine the protein expression levels in miR-203a-3p-overexpressing HT29 cells. *P<0.05, **P<0.01 vs. NC. E-cad, E-cadherin; miR, microRNA; N-cad, N-cadherin; NC, negative control.

miR-203a-3p target-gene luciferase reporter assay

The TargetScan Release 5.0 database predicted that THBS2 was a downstream target of miR-203a-3p, and revealed miR-203a-3p target sites within the 3′UTR of THBS2 mRNA (Fig. 6A). A negative correlation was also observed between miR-203a-3p and THBS2 expression in TCGA (Fig. 6B). To verify whether miR-203a-3p binds directly to the 3′UTR region of THBS2, two groups of luciferase reporter constructs were used. Subsequently, cells were co-transfected with miR-203a-3p mimics and two luciferase reporter constructs, one group in the presence of the wild-type (THBS2-wt) 3′UTR, and the other in the presence of the mutant (THBS2-mut) 3′UTR. Luciferase activity in the wt group was significantly lower compared with that in the control group; however, the activity in the mutant luciferase reporter group was markedly unaffected (Fig. 6C). These data indicate that the THBS2 3′UTR contains a specific miR-203a-3p target site. In HT29 cells, overexpression of miR-203a-3p following transfection with miR-203a-3p mimics caused downregulation of THBS2 expression at the protein level (Fig. 6D). These results indicated that THBS2 is a target gene of miR-203a-3p.

Figure 6.

miR-203a-3p binds to the 3′UTR of THBS2. (A) Base pairing of THBS2 and miR-203a-3p, and (B) negative correlation of THBS2 and miR-203a-3p in The Cancer Genome Atlas. (C) Luciferase assay. (D) Western blot analysis of miR-NC and miR-203a-3p-transfected HT29 and SW480 cells. **P<0.01 vs. NC. 3′UTR, 3′-untranslated region; hsa, homo sapiens; miR, microRNA; NC, negative control; THBS2, thrombospondin 2.

Discussion

Accumulating evidence has revealed associations between miRNAs and a wide range of tumors (31,32) and, more specifically, between aberrant miRNA-203a-3p expression and tumorigenesis (13–15). miRNA-203a-3p serves different roles in a variety of cancers, depending on the type of the tumor and the targeted genes.

In the present study, we found that the expression of miRNA-203a-3p in CRC tissues was significantly downregulated compared with that in paired normal tissues, which indicates that miRNA-203a-3p plays a tumor-suppressive role in human CRC. miRNA-203a-3p overexpression was also found to suppress metastatic ability in our study, further confirming that miRNA-203a-3p serves an important role in CRC metastasis. It was also demonstrated that miRNA-203a-3p affected CRC cell apoptosis.

To explore the function of miRNA-203a-3p in CRC and to determine the underlying mechanism, the identification of regulatory targets is crucial. Our western blot results indicated that miRNA-203a-3p promotes tumor metastasis and growth. Overexpression of miRNA-203a-3p expression led to downregulation of N-cadherin, vimentin and the increased expression of E-cad and Bax, which may cause tumor progression. By reviewing miRNA databases, THBS2 was identified as a candidate downstream target of miRNA-203a-3p. THBS2 is secreted by stromal fibroblasts, endothelial cells and immune cells, and it belongs to the THBS family of proteins (24). THBS2 affects interactions between cells and is a potent tumor suppressor with a role in CRC (22,23). THBS2 was found to be significantly upregulated in CRC tissues, and it was demonstrated that its expression was negatively correlated with CRC prognosis.

To verify whether miRNA-203a-3p binds directly to the 3′UTR region of THBS2, two groups of luciferase reporter constructs were used. Subsequently, cells were co-transfected with miRNA-203a-3p mimics and the two luciferase reporter constructs, one group in the presence of THBS2-wt 3′UTR, and the other in the presence of the THBS2-mut 3′UTR. Luciferase activity in the wt group was found to be significantly lower compared with that in the control group; however, activity in the mutant THBS2 luciferase reporter group was markedly unaffected. These data indicate that the THBS2 3′UTR contains a specific miRNA-203a-3p target site. Combining those results with our findings that miRNA-203a-3p suppresses proliferation, apoptosis and metastasis of CRC cells, it may be concluded that miRNA-203a-3p exerts a suppressive effect on CRC cells through the suppression of THBS2. In the future, we aim to employ an animal model to confirm the results of our in vitro analysis.

In summary, the present study provided evidence that miRNA-203a-3p is downregulated in CRC tissues and cell lines, and affects CRC metastasis by targeting THBS2. These findings suggest that miRNA-203a-3p may act as a tumor suppressor in CRC.