Literature DB >> 31537647

A conserved Bcd1 interaction essential for box C/D snoRNP biogenesis.

Sohail Khoshnevis1,2, R Elizabeth Dreggors2,3, Tobias F R Hoffmann2, Homa Ghalei4,3.   

Abstract

Precise modification and processing of rRNAs are required for the production of ribosomes and accurate translation of proteins. Small nucleolar ribonucleoproteins (snoRNPs) guide the folding, modification, and processing of rRNAs and are thus critical for all eukaryotic cells. Bcd1, an essential zinc finger HIT protein functionally conserved in eukaryotes, has been implicated as an early regulator for biogenesis of box C/D snoRNPs and controls steady-state levels of box C/D snoRNAs through an unknown mechanism. Using a combination of genetic and biochemical approaches, here we found a conserved N-terminal motif in Bcd1 from Saccharomyces cerevisiae that is required for interactions with box C/D snoRNAs and the core snoRNP protein, Snu13. We show that both the Bcd1-snoRNA and Bcd1-Snu13 interactions are critical for snoRNP assembly and ribosome biogenesis. Our results provide mechanistic insight into Bcd1 interactions that likely control the early steps of snoRNP maturation and contribute to the essential role of this protein in maintaining the steady-state levels of snoRNAs in the cell.
© 2019 Khoshnevis et al.

Entities:  

Keywords:  Bcd1; RNA; RNA binding protein; RNA methylation; RNA modification; Snu13; assembly factor; box C/D snoRNA; posttranscriptional regulation; rRNA processing; ribonuclear protein (RNP); ribosome assembly; ribosome biogenesis; small nucleolar RNA (snoRNA); small nucleolar ribonucleoprotein (snoRNP) assembly; snoRNP assembly; zinc finger HIT-type containing 6 (ZNHIT6)

Mesh:

Substances:

Year:  2019        PMID: 31537647      PMCID: PMC6885627          DOI: 10.1074/jbc.RA119.010222

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  60 in total

1.  Exclusive interaction of the 15.5 kD protein with the terminal box C/D motif of a methylation guide snoRNP.

Authors:  Lara B Weinstein Szewczak; Suzanne J DeGregorio; Scott A Strobel; Joan A Steitz
Journal:  Chem Biol       Date:  2002-10

2.  Efficient RNA 2'-O-methylation requires juxtaposed and symmetrically assembled archaeal box C/D and C'/D' RNPs.

Authors:  Elizabeth J Tran; Xinxin Zhang; E Stuart Maxwell
Journal:  EMBO J       Date:  2003-08-01       Impact factor: 11.598

Review 3.  Chaperone-like activity of the AAA+ proteins Rvb1 and Rvb2 in the assembly of various complexes.

Authors:  Nardin Nano; Walid A Houry
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-25       Impact factor: 6.237

4.  Regulation of Rvb1/Rvb2 by a Domain within the INO80 Chromatin Remodeling Complex Implicates the Yeast Rvbs as Protein Assembly Chaperones.

Authors:  Coral Y Zhou; Caitlin I Stoddard; Jonathan B Johnston; Michael J Trnka; Ignacia Echeverria; Eugene Palovcak; Andrej Sali; Alma L Burlingame; Yifan Cheng; Geeta J Narlikar
Journal:  Cell Rep       Date:  2017-06-06       Impact factor: 9.423

5.  Functional and Structural Insights of the Zinc-Finger HIT protein family members Involved in Box C/D snoRNP Biogenesis.

Authors:  Benoit Bragantini; Decebal Tiotiu; Benjamin Rothé; Jean-Michel Saliou; Hélène Marty; Sarah Cianférani; Bruno Charpentier; Marc Quinternet; Xavier Manival
Journal:  J Mol Biol       Date:  2016-04-30       Impact factor: 5.469

Review 6.  Small Nucleolar RNAs Tell a Different Tale.

Authors:  Joanna Kufel; Pawel Grzechnik
Journal:  Trends Genet       Date:  2018-12-16       Impact factor: 11.639

7.  A dynamic scaffold of pre-snoRNP factors facilitates human box C/D snoRNP assembly.

Authors:  Kenneth Scott McKeegan; Charles Maurice Debieux; Séverine Boulon; Edouard Bertrand; Nicholas James Watkins
Journal:  Mol Cell Biol       Date:  2007-07-16       Impact factor: 4.272

8.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

9.  Proteomic and 3D structure analyses highlight the C/D box snoRNP assembly mechanism and its control.

Authors:  Jonathan Bizarro; Christophe Charron; Séverine Boulon; Belinda Westman; Bérengère Pradet-Balade; Franck Vandermoere; Marie-Eve Chagot; Marie Hallais; Yasmeen Ahmad; Heinrich Leonhardt; Angus Lamond; Xavier Manival; Christiane Branlant; Bruno Charpentier; Céline Verheggen; Edouard Bertrand
Journal:  J Cell Biol       Date:  2014-11-17       Impact factor: 10.539

10.  The Phyre2 web portal for protein modeling, prediction and analysis.

Authors:  Lawrence A Kelley; Stefans Mezulis; Christopher M Yates; Mark N Wass; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2015-05-07       Impact factor: 13.491

View more
  4 in total

1.  The box C/D snoRNP assembly factor Bcd1 interacts with the histone chaperone Rtt106 and controls its transcription dependent activity.

Authors:  Benoît Bragantini; Christophe Charron; Maxime Bourguet; Arnaud Paul; Decebal Tiotiu; Benjamin Rothé; Hélène Marty; Guillaume Terral; Steve Hessmann; Laurence Decourty; Marie-Eve Chagot; Jean-Marc Strub; Séverine Massenet; Edouard Bertrand; Marc Quinternet; Cosmin Saveanu; Sarah Cianférani; Stéphane Labialle; Xavier Manival; Bruno Charpentier
Journal:  Nat Commun       Date:  2021-03-25       Impact factor: 14.919

2.  Ribosomal RNA 2'-O-methylations regulate translation by impacting ribosome dynamics.

Authors:  Sohail Khoshnevis; R Elizabeth Dreggors-Walker; Virginie Marchand; Yuri Motorin; Homa Ghalei
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-16       Impact factor: 11.205

Review 3.  Emerging Data on the Diversity of Molecular Mechanisms Involving C/D snoRNAs.

Authors:  Laeya Baldini; Bruno Charpentier; Stéphane Labialle
Journal:  Noncoding RNA       Date:  2021-05-06

Review 4.  The ribosome epitranscriptome: inert-or a platform for functional plasticity?

Authors:  Joseph Georgeson; Schraga Schwartz
Journal:  RNA       Date:  2021-07-26       Impact factor: 4.942

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.