| Literature DB >> 31534695 |
Riana Gardiner1, Rowena Hamer1, Vianey Leos-Barajas2,3, Cesar Peñaherrera-Palma4, Menna E Jones1, Chris Johnson1.
Abstract
Habitat loss is a major cause of species loss and is expected to increase. Loss of habitat is often associated with fragmentation of remaining habitat. Whether species can persist in fragmented landscapes may depend on their movement behavior, which determines their capability to respond flexibility to changes in habitat structure and spatial distribution of patches.Movement is frequently generalized to describe a total area used, or segmented to highlight resource use, often overlooking finer-scale individual behaviors. We applied hidden Markov models (HMM) to movement data from 26 eastern bettongs (Bettongia gaimardi) in fragmented landscapes. HMMs are able to identify distinct behavior states associated with different movement patterns and discover how these behaviors are associated with habitat features.Three distinct behavior states were identified and interpreted as denning, foraging, and fast-traveling. The probability of occurrence of each state, and of transitions between them, was predicted by variation in tree-canopy cover and understorey vegetation density. Denning was associated with woodland with low canopy cover but high vegetation density, foraging with high canopy cover but low vegetation density, and fast-traveling with low canopy cover and low vegetation density.Bettongs did move outside woodland patches, often fast-traveling through pasture and using smaller stands of trees as stepping stones between neighboring patches. Males were more likely to fast-travel and venture outside woodlands patches, while females concentrated their movement within woodland patches. Synthesis and applications: Our work demonstrates the value of using animal movement to understand how animals respond to variation in habitat structure, including fragmentation. Analysis using HMMs was able to characterize distinct habitat types needed for foraging and denning, and identify landscape features that facilitate movement between patches. Future work should extend the use of individual movement analyses to guide management of fragmented habitat in ways that support persistence of species potentially threatened by habitat loss.Entities:
Keywords: Hidden Markov Models; conservation; fragmentation; management; movement ecology; restoration
Year: 2019 PMID: 31534695 PMCID: PMC6745662 DOI: 10.1002/ece3.5519
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 3.167
Figure 1Histogram depicting the density of step lengths and turning angle distributions derived from a three‐state model for all tracked individuals
Tracking of eastern bettongs at the three different sites in the Midlands bioregion of Tasmania, Australia. Each site differed in the size, configuration, and quality of habitat, site 1 being low in fragmentation, site 2 medium, and site 3 high fragmentation. The sites are represented using unsupervised K‐mean values of Landsat imagery to classify vegetation density between 0 and 10 mean clusters
Likelihood and AIC values obtained from the Hidden Markov Models testing (a) feasibility of a three‐state model versus a two‐state model, (b) Habitat attributes tested to determine what drives transitions between states using a three‐state model
| Model | Delta AIC | Log likelihood |
|---|---|---|
| 3‐state | 0 | −10,300.02 |
| 2‐state | 2,442.44 | −11,531.24 |
| VegIndex + cover+sex | 0 | −9,842.499 |
| VegIndex + sex | 8.24 | −9,852.619 |
| VegIndex + edge+sex | 108.54 | −9,896.768 |
| VegIndex + cover | 266.89 | −9,981.944 |
| VegIndex | 267.88 | −9,988.439 |
| Cover + edge+sex | 367.59 | −10,068.3 |
| VegIndex + edge | 367.78 | −10,032.39 |
| Sex + edge | 469.28 | −10,125.14 |
| Sex + cover | 481.15 | −10,131.07 |
| Sex | 591.45 | −10,192.22 |
| Cover | 683.89 | −10,238.44 |
| Edge + cover | 776.13 | −10,278.57 |
| Null | 795.05 | −10,300.02 |
| Edge | 991.22 | −10,392.11 |
Figure 2Example of bettong's locations, color coded by their corresponding state. Yellow is denning (state 1), blue is foraging (state 2), and green is fast‐traveling (state 3). This individual fast travelled across the matrix and used smaller stand of trees as stepping stones
Figure 3Example of stationary state probabilities of amount of cover for each sex. I show stationary probabilities for low (top), medium (middle), and high (bottom) woodland canopy cover