Literature DB >> 31533901

Genome-wide survey and expression analysis of the SLAC/SLAH gene family in pear (Pyrus bretschneideri) and other members of the Rosaceae.

Guodong Chen1, Xiaolong Li1, Xin Qiao1, Jiaming Li1, Li Wang1, Xiaobing Kou1, Xiao Wu1, Guoming Wang1, Hao Yin1, Peng Wang1, Shaoling Zhang1, Juyou Wu2.   

Abstract

S-type anion channels, which play important roles in plant anion (such as nitrate and chloride) transport, growth and development, abiotic stress responses and hormone signaling. However, there is far less information about this family in Rosaceae species. We performed a genome-wide analysis and identified SLAC/SLAH gene family members in pear (Pyrus bretschneideri) and four other species of Rosaceae. A total of 21 SLAC/SLAH genes were identified from the five Rosaceae species. Based on the structural characteristics and a phylogenetic analysis of these genes, the SLAC/SLAH gene family could be classified into three main groups. Transcriptome data demonstrated that PbrSLAC/SLAH genes were detected in all parts of the pear. PbrSLAC/SLAH genes were only located on the plasma membrane in transient expression experiments in Arabidopsis protoplasts cells. These results provide valuable information that increases our understanding of the evolution, expression and functions of the SLAC/SLAH gene family in higher plants.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Pear (Pyrus bretschneideri); Rosaceae; Slow anion channel; Subcellular localization

Mesh:

Substances:

Year:  2018        PMID: 31533901     DOI: 10.1016/j.ygeno.2018.07.004

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


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