Literature DB >> 31531201

Discovery of N-(1-Acryloylazetidin-3-yl)-2-(1H-indol-1-yl)acetamides as Covalent Inhibitors of KRASG12C.

Youngsook Shin1, Joon Won Jeong2, Ryan P Wurz1, Pragathi Achanta1, Tara Arvedson1, Michael D Bartberger1, Iain D G Campuzano1, Ray Fucini2, Stig K Hansen2, John Ingersoll1, Jeffrey S Iwig2, J Russell Lipford1, Vu Ma1, David J Kopecky1, John McCarter1, Tisha San Miguel1, Christopher Mohr1, Sudi Sabet2, Anne Y Saiki1, Andrew Sawayama2, Steven Sethofer2, Christopher M Tegley1, Laurie P Volak1, Kevin Yang1, Brian A Lanman1, Daniel A Erlanson2, Victor J Cee1.   

Abstract

KRAS regulates many cellular processes including proliferation, survival, and differentiation. Point mutants of KRAS have long been known to be molecular drivers of cancer. KRAS p.G12C, which occurs in approximately 14% of lung adenocarcinomas, 3-5% of colorectal cancers, and low levels in other solid tumors, represents an attractive therapeutic target for covalent inhibitors. Herein, we disclose the discovery of a class of novel, potent, and selective covalent inhibitors of KRASG12C identified through a custom library synthesis and screening platform called Chemotype Evolution and structure-based design. Identification of a hidden surface groove bordered by H95/Y96/Q99 side chains was key to the optimization of this class of molecules. Best-in-series exemplars exhibit a rapid covalent reaction with cysteine 12 of GDP-KRASG12C with submicromolar inhibition of downstream signaling in a KRASG12C-specific manner.

Entities:  

Year:  2019        PMID: 31531201      PMCID: PMC6746093          DOI: 10.1021/acsmedchemlett.9b00258

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  16 in total

1.  Site-directed ligand discovery.

Authors:  D A Erlanson; A C Braisted; D R Raphael; M Randal; R M Stroud; E M Gordon; J A Wells
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-15       Impact factor: 11.205

Review 2.  The Ras superfamily at a glance.

Authors:  Krister Wennerberg; Kent L Rossman; Channing J Der
Journal:  J Cell Sci       Date:  2005-03-01       Impact factor: 5.285

Review 3.  Drugging the undruggable RAS: Mission possible?

Authors:  Adrienne D Cox; Stephen W Fesik; Alec C Kimmelman; Ji Luo; Channing J Der
Journal:  Nat Rev Drug Discov       Date:  2014-10-17       Impact factor: 84.694

Review 4.  Blocking oncogenic Ras signaling for cancer therapy.

Authors:  A A Adjei
Journal:  J Natl Cancer Inst       Date:  2001-07-18       Impact factor: 13.506

5.  Chemical and computational methods for the characterization of covalent reactive groups for the prospective design of irreversible inhibitors.

Authors:  Mark E Flanagan; Joseph A Abramite; Dennis P Anderson; Ann Aulabaugh; Upendra P Dahal; Adam M Gilbert; Chao Li; Justin Montgomery; Stacey R Oppenheimer; Tim Ryder; Brandon P Schuff; Daniel P Uccello; Gregory S Walker; Yan Wu; Matthew F Brown; Jinshan M Chen; Matthew M Hayward; Mark C Noe; R Scott Obach; Laurence Philippe; Veerabahu Shanmugasundaram; Michael J Shapiro; Jeremy Starr; Justin Stroh; Ye Che
Journal:  J Med Chem       Date:  2014-11-26       Impact factor: 7.446

Review 6.  Ras oncogenes: split personalities.

Authors:  Antoine E Karnoub; Robert A Weinberg
Journal:  Nat Rev Mol Cell Biol       Date:  2008-07       Impact factor: 94.444

7.  Systematic Study of the Glutathione (GSH) Reactivity of N-Arylacrylamides: 1. Effects of Aryl Substitution.

Authors:  Victor J Cee; Laurie P Volak; Yuping Chen; Michael D Bartberger; Chris Tegley; Tara Arvedson; John McCarter; Andrew S Tasker; Christopher Fotsch
Journal:  J Med Chem       Date:  2015-11-18       Impact factor: 7.446

Review 8.  Targeting RAS signalling pathways in cancer therapy.

Authors:  Julian Downward
Journal:  Nat Rev Cancer       Date:  2003-01       Impact factor: 60.716

9.  K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.

Authors:  Jonathan M Ostrem; Ulf Peters; Martin L Sos; James A Wells; Kevan M Shokat
Journal:  Nature       Date:  2013-11-20       Impact factor: 49.962

10.  Novel allosteric sites on Ras for lead generation.

Authors:  Barry J Grant; Suryani Lukman; Harrison J Hocker; Jaqueline Sayyah; Joan Heller Brown; J Andrew McCammon; Alemayehu A Gorfe
Journal:  PLoS One       Date:  2011-10-25       Impact factor: 3.240

View more
  12 in total

1.  KRAS G12C fragment screening renders new binding pockets.

Authors:  Magali Mathieu; Valérie Steier; Florence Fassy; Cécile Delorme; David Papin; Bruno Genet; Francis Duffieux; Thomas Bertrand; Laure Delarbre; Hélène Le-Borgne; Annick Parent; Patrick Didier; Jean-Pierre Marquette; Maryse Lowinski; Jacques Houtmann; Annabelle Lamberton; Laurent Debussche; Rak Alexey
Journal:  Small GTPases       Date:  2021-09-24

Review 2.  Addressing Atropisomerism in the Development of Sotorasib, a Covalent Inhibitor of KRAS G12C: Structural, Analytical, and Synthetic Considerations.

Authors:  Brian A Lanman; Andrew T Parsons; Stephan G Zech
Journal:  Acc Chem Res       Date:  2022-09-30       Impact factor: 24.466

3.  Functionalized Scout Fragments for Site-Specific Covalent Ligand Discovery and Optimization.

Authors:  Vincent M Crowley; Marvin Thielert; Benjamin F Cravatt
Journal:  ACS Cent Sci       Date:  2021-04-05       Impact factor: 18.728

4.  KRAS(G12C)-AMG 510 interaction dynamics revealed by all-atom molecular dynamics simulations.

Authors:  Tatu Pantsar
Journal:  Sci Rep       Date:  2020-07-20       Impact factor: 4.379

Review 5.  Structure-based inhibitor design of mutant RAS proteins-a paradigm shift.

Authors:  Kinga Nyíri; Gergely Koppány; Beáta G Vértessy
Journal:  Cancer Metastasis Rev       Date:  2020-12       Impact factor: 9.264

Review 6.  KRasG12C inhibitors in clinical trials: a short historical perspective.

Authors:  Lisa Goebel; Matthias P Müller; Roger S Goody; Daniel Rauh
Journal:  RSC Med Chem       Date:  2020-06-01

Review 7.  Small-Molecule RAS Inhibitors as Anticancer Agents: Discovery, Development, and Mechanistic Studies.

Authors:  Shaila A Shetu; Debasish Bandyopadhyay
Journal:  Int J Mol Sci       Date:  2022-03-28       Impact factor: 5.923

8.  Overexpression of ABCB1 Associated With the Resistance to the KRAS-G12C Specific Inhibitor ARS-1620 in Cancer Cells.

Authors:  Xing-Duo Dong; Meng Zhang; Chao-Yun Cai; Qiu-Xu Teng; Jing-Quan Wang; Yi-Ge Fu; Qingbin Cui; Ketankumar Patel; Dong-Tao Wang; Zhe-Sheng Chen
Journal:  Front Pharmacol       Date:  2022-02-23       Impact factor: 5.810

Review 9.  The path to the clinic: a comprehensive review on direct KRASG12C inhibitors.

Authors:  Albert K Kwan; Gary A Piazza; Adam B Keeton; Caio A Leite
Journal:  J Exp Clin Cancer Res       Date:  2022-01-19

10.  In silico screening-based discovery of novel covalent inhibitors of the SARS-CoV-2 3CL protease.

Authors:  Muya Xiong; Tianqing Nie; Qiang Shao; Minjun Li; Haixia Su; Yechun Xu
Journal:  Eur J Med Chem       Date:  2022-01-23       Impact factor: 6.514

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.