Literature DB >> 31524988

Community Curation and Expert Curation of Human Long Noncoding RNAs with LncRNAWiki and LncBook.

Lina Ma1,2, Jiabao Cao1,2,3, Lin Liu1,2,3, Zhao Li1,2,3, Huma Shireen4, Nashaiman Pervaiz4, Fatima Batool4, Rabail Z Raza4, Dong Zou1,2, Yiming Bao1,2,3, Amir A Abbasi4, Zhang Zhang1,2,3.   

Abstract

In recent years, the number of human long noncoding RNAs (lncRNAs) that have been identified has increased exponentially. However, these lncRNAs are poorly annotated compared to protein-coding genes, posing great challenges for a better understanding of their functional significance and elucidating their complex functioning molecular mechanisms. Here we employ both community and expert curation to yield a comprehensive collection of human lncRNAs and their annotations. Specifically, LncRNAWiki (http://lncrna.big.ac.cn/index.php/Main_Page) uses a wiki-based community curation model, thus showing great promise in dealing with the flood of biological knowledge, while LncBook (http://bigd.big.ac.cn/lncbook) is an expert curation-based database that provides a complement to LncRNAWiki. LncBook features a comprehensive collection of human lncRNAs and a systematic curation of lncRNAs by multi-omics data integration, functional annotation, and disease association. These protocols provide step-by-step instructions on how to browse and search a specific lncRNA and how to obtain a range of related information including expression, methylation, variation, function, and disease association.
© 2019 by John Wiley & Sons, Inc. © 2019 John Wiley & Sons, Inc.

Entities:  

Keywords:  community curation; disease; expert curation; long noncoding RNA; multi-omics data

Mesh:

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Year:  2019        PMID: 31524988     DOI: 10.1002/cpbi.82

Source DB:  PubMed          Journal:  Curr Protoc Bioinformatics        ISSN: 1934-3396


  2 in total

1.  Database Resources of the National Genomics Data Center in 2020.

Authors: 
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

2.  LncRNAs and Available Databases.

Authors:  Sara Napoli
Journal:  Methods Mol Biol       Date:  2021
  2 in total

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