Literature DB >> 31520605

The big BAM theory: An open and closed case?

Runrun Wu1, Robert Stephenson1, Abigail Gichaba1, Nicholas Noinaj2.   

Abstract

The β-barrel assembly machinery (BAM) is responsible for the biogenesis of outer membrane proteins (OMPs) into the outer membranes of Gram-negative bacteria. These OMPs have a membrane-embedded domain consisting of a β-barrel fold which can vary from 8 to 36 β-strands, with each serving a diverse role in the cell such as nutrient uptake and virulence. BAM was first identified nearly two decades ago, but only recently has the molecular structure of the full complex been reported. Together with many years of functional characterization, we have a significantly clearer depiction of BAM's structure, the intra-complex interactions, conformational changes that BAM may undergo during OMP biogenesis, and the role chaperones may play. But still, despite advances over the past two decades, the mechanism for BAM-mediated OMP biogenesis remains elusive. Over the years, several theories have been proposed that have varying degrees of support from the literature, but none has of yet been conclusive enough to be widely accepted as the sole mechanism. We will present a brief history of BAM, the recent work on the structures of BAM, and a critical analysis of the current theories for how it may function.
Copyright © 2019. Published by Elsevier B.V.

Entities:  

Keywords:  BAM complex; Conformational plasticity; Crosslinking; Gram-negative bacteria; Membrane protein; Outer membrane; Protein biogenesis; Protein folding

Mesh:

Substances:

Year:  2019        PMID: 31520605      PMCID: PMC7188740          DOI: 10.1016/j.bbamem.2019.183062

Source DB:  PubMed          Journal:  Biochim Biophys Acta Biomembr        ISSN: 0005-2736            Impact factor:   3.747


  9 in total

1.  Structure Determination of Membrane Proteins Using X-Ray Crystallography.

Authors:  Evan Billings; Karl Lundquist; Claire Overly; Karthik Srinivasan; Nicholas Noinaj
Journal:  Methods Mol Biol       Date:  2021

2.  SurA is a cryptically grooved chaperone that expands unfolded outer membrane proteins.

Authors:  Dagan C Marx; Ashlee M Plummer; Anneliese M Faustino; Taylor Devlin; Michaela A Roskopf; Mathis J Leblanc; Henry J Lessen; Barbara T Amann; Patrick J Fleming; Susan Krueger; Stephen D Fried; Karen G Fleming
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-22       Impact factor: 11.205

3.  Domain interactions determine the conformational ensemble of the periplasmic chaperone SurA.

Authors:  Dagan C Marx; Mathis J Leblanc; Ashlee M Plummer; Susan Krueger; Karen G Fleming
Journal:  Protein Sci       Date:  2020-08-31       Impact factor: 6.725

4.  Interplay of protein primary sequence, lipid membrane, and chaperone in β-barrel assembly.

Authors:  Pankaj B Tiwari; Radhakrishnan Mahalakshmi
Journal:  Protein Sci       Date:  2021-01-16       Impact factor: 6.993

Review 5.  Building Better Barrels - β-barrel Biogenesis and Insertion in Bacteria and Mitochondria.

Authors:  Kathryn A Diederichs; Susan K Buchanan; Istvan Botos
Journal:  J Mol Biol       Date:  2021-02-24       Impact factor: 5.469

6.  Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM.

Authors:  Runrun Wu; Jeremy W Bakelar; Karl Lundquist; Zijian Zhang; Katie M Kuo; David Ryoo; Yui Tik Pang; Chen Sun; Tommi White; Thomas Klose; Wen Jiang; James C Gumbart; Nicholas Noinaj
Journal:  Nat Commun       Date:  2021-12-08       Impact factor: 14.919

7.  Divide and Conquer: A Tailored Solid-state NMR Approach to Study Large Membrane Protein Complexes.

Authors:  ShengQi Xiang; Cecilia Pinto; Marc Baldus
Journal:  Angew Chem Int Ed Engl       Date:  2022-07-07       Impact factor: 16.823

8.  Structural Modeling of the Treponema pallidum Outer Membrane Protein Repertoire: a Road Map for Deconvolution of Syphilis Pathogenesis and Development of a Syphilis Vaccine.

Authors:  Kelly L Hawley; Jairo M Montezuma-Rusca; Kristina N Delgado; Navreeta Singh; Vladimir N Uversky; Melissa J Caimano; Justin D Radolf; Amit Luthra
Journal:  J Bacteriol       Date:  2021-07-08       Impact factor: 3.490

9.  Chaperone Spy Protects Outer Membrane Proteins from Folding Stress via Dynamic Complex Formation.

Authors:  Wei He; Gangjin Yu; Tianpeng Li; Ling Bai; Yuanyuan Yang; Zixiao Xue; Yonghao Pang; Dana Reichmann; Sebastian Hiller; Lichun He; Maili Liu; Shu Quan
Journal:  mBio       Date:  2021-10-05       Impact factor: 7.867

  9 in total

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