Literature DB >> 31519662

Ammonia Oxidizers in High-Elevation Rivers of the Qinghai-Tibet Plateau Display Distinctive Distribution Patterns.

Sibo Zhang1, Xinghui Xia2, Siling Li1, Liwei Zhang1, Gongqin Wang1, Meishui Li1, Yinan Shi1, Nengwang Chen3.   

Abstract

Ammonia-oxidizing bacteria (AOB) and archaea (AOA) as well as comammox catalyze ammonia oxidation. The distribution and biogeography of these ammonia oxidizers might be distinctive in high-elevation rivers, which are generally characterized by low temperature and low ammonium concentration but strong solar radiation; however, these characteristics have rarely been documented. This study explored the abundance, community, and activity of ammonia oxidizers in the overlying water of five rivers in the Qinghai-Tibet Plateau (QTP). Potential nitrification rates in these rivers ranged from 5.4 to 38.4 nmol N liter-1 h-1, and they were significantly correlated with ammonium concentration rather than temperature. Comammox were found in 25 of the total 28 samples, and they outnumbered AOA in three samples. Contrary to most studied low-elevation rivers, average AOB amoA gene abundance was significantly higher than that of AOA, and AOB/AOA ratios increased with decreasing water temperature. The Simpson index of the AOA community increased with elevation (P < 0.05), and AOA and AOB communities exhibited high dissimilarities with low-elevation rivers. Cold-adapted (Nitrosospira amoA cluster 1, 33.6%) and oligotrophic (Nitrosomonas amoA cluster 6a, 31.7%) groups accounted for large proportions in the AOB community. Suspended sediment concentration exerted significant effects on ammonia oxidizer abundance (r > 0.56), and owing to their elevational variations in source and concentration, suspended sediments facilitated distance-decay patterns for AOA and AOB community similarities. This study demonstrates distinctive biogeography and distribution patterns for ammonia oxidizers in high-elevation rivers of the QTP. Extensive research should be conducted to explore the role of these microbes in the nitrogen cycle of this zone.IMPORTANCE Ammonia-oxidizing archaea (AOA) and bacteria (AOB) as well as comammox contribute to ammonia oxidation, which plays significant roles in riverine nitrogen cycle and N2O production. Source regions of numerous rivers in the world lie in high-elevation zones, but the abundance, community, and activity of ammonia oxidizers in rivers in high-elevation regions have rarely been investigated. This study revealed distinctive distribution patterns and community structures for ammonia oxidizers in five high-elevation rivers of the Qinghai-Tibet Plateau, and the individual and combined effects of low temperature, low nutrients, and strong solar radiation on ammonia oxidizers were elucidated. The findings of this study are helpful to broaden our knowledge on the biogeography and distribution pattern of ammonia oxidizers in river systems. Moreover, this study provides some implications to predict the performance of ammonia oxidizers in high-elevation rivers and its variations under global climate warming.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  Qinghai-Tibet Plateau; ammonia-oxidizing archaea (AOA); comammox Nitrospira; distance-decay pattern; high-elevation rivers; suspended sediment

Year:  2019        PMID: 31519662      PMCID: PMC6821956          DOI: 10.1128/AEM.01701-19

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  43 in total

1.  Climate change will affect the Asian water towers.

Authors:  Walter W Immerzeel; Ludovicus P H van Beek; Marc F P Bierkens
Journal:  Science       Date:  2010-06-11       Impact factor: 47.728

2.  Diversity and abundance of ammonia-oxidizing archaea in the Dongjiang River, China.

Authors:  Zhenghui Liu; Shaobin Huang; Guoping Sun; Zhencheng Xu; Meiying Xu
Journal:  Microbiol Res       Date:  2010-09-23       Impact factor: 5.415

3.  Links between ammonia oxidizer species composition, functional diversity and nitrification kinetics in grassland soils.

Authors:  Gordon Webster; T Martin Embley; Thomas E Freitag; Zena Smith; James I Prosser
Journal:  Environ Microbiol       Date:  2005-05       Impact factor: 5.491

4.  Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities.

Authors:  Patrick D Schloss; Sarah L Westcott; Thomas Ryabin; Justine R Hall; Martin Hartmann; Emily B Hollister; Ryan A Lesniewski; Brian B Oakley; Donovan H Parks; Courtney J Robinson; Jason W Sahl; Blaz Stres; Gerhard G Thallinger; David J Van Horn; Carolyn F Weber
Journal:  Appl Environ Microbiol       Date:  2009-10-02       Impact factor: 4.792

Review 5.  Insights into the physiology of ammonia-oxidizing microorganisms.

Authors:  Lisa Y Stein
Journal:  Curr Opin Chem Biol       Date:  2018-09-17       Impact factor: 8.822

6.  Nitrous oxide emission from denitrification in stream and river networks.

Authors:  Jake J Beaulieu; Jennifer L Tank; Stephen K Hamilton; Wilfred M Wollheim; Robert O Hall; Patrick J Mulholland; Bruce J Peterson; Linda R Ashkenas; Lee W Cooper; Clifford N Dahm; Walter K Dodds; Nancy B Grimm; Sherri L Johnson; William H McDowell; Geoffrey C Poole; H Maurice Valett; Clay P Arango; Melody J Bernot; Amy J Burgin; Chelsea L Crenshaw; Ashley M Helton; Laura T Johnson; Jonathan M O'Brien; Jody D Potter; Richard W Sheibley; Daniel J Sobota; Suzanne M Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-20       Impact factor: 11.205

7.  Responses of Active Ammonia Oxidizers and Nitrification Activity in Eutrophic Lake Sediments to Nitrogen and Temperature.

Authors:  Ling Wu; Cheng Han; Guangwei Zhu; Wenhui Zhong
Journal:  Appl Environ Microbiol       Date:  2019-08-29       Impact factor: 4.792

8.  AmoA-Targeted Polymerase Chain Reaction Primers for the Specific Detection and Quantification of Comammox Nitrospira in the Environment.

Authors:  Petra Pjevac; Clemens Schauberger; Lianna Poghosyan; Craig W Herbold; Maartje A H J van Kessel; Anne Daebeler; Michaela Steinberger; Mike S M Jetten; Sebastian Lücker; Michael Wagner; Holger Daims
Journal:  Front Microbiol       Date:  2017-08-04       Impact factor: 5.640

9.  The large-scale distribution of ammonia oxidizers in paddy soils is driven by soil pH, geographic distance, and climatic factors.

Authors:  Hang-Wei Hu; Li-Mei Zhang; Chao-Lei Yuan; Yong Zheng; Jun-Tao Wang; Deli Chen; Ji-Zheng He
Journal:  Front Microbiol       Date:  2015-09-04       Impact factor: 5.640

10.  Shifts in the pelagic ammonia-oxidizing microbial communities along the eutrophic estuary of Yong River in Ningbo City, China.

Authors:  Qiufang Zhang; Fangyuan Tang; Yangjing Zhou; Jirong Xu; Heping Chen; Mingkuang Wang; Hendrikus J Laanbroek
Journal:  Front Microbiol       Date:  2015-10-27       Impact factor: 5.640

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