Literature DB >> 31513283

Circulating miRNA expression profile and bioinformatics analysis in patients with occult hepatitis B virus infection.

Qing-Qin Hao1, Qing-Hui Wang1, Wei Xia1, Hui-Zhong Qian1.   

Abstract

Emerging suggest that microRNAs (miRNAs) play vital roles in the occurrence and development of hepatitis B virus (HBV) infectious disease. However, miRNAs in occult hepatitis B virus infection (OBI), a special stage of HBV infection, remain largely unknown. Herein, we conducted this study to identify differentially expressed miRNAs and then to investigate the potential roles of these miRNAs in OBI. Plasma miRNA expression profiles of three OBI patients and three healthy controls were analyzed with high through-put miRNA sequencing technology. Altered expression of miRNAs was further confirmed with reverse transcription quantitative polymerase chain reaction (qRT-PCR). Finally, bioinformatics analysis was conducted to investigate the involved pathways and target genes for these differentially expressed miRNAs. Totally, 32 differentially expressed miRNAs were identified between OBI and healthy controls by miRNA sequencing (fold change ≥ 1.5, P < .1, and counts per million reads ≥ 1), including 16 downregulated and 16 upregulated miRNAs. Differential expression of hsa-miR-486-5p, -25-3p, and -92a-3p and -1-3p was further validated by qRT-PCR analysis, which was consistent with miRNA sequencing analysis. Moreover, these four miRNAs might distinguish OBI from HCs efficiently. Bioinformatics analyses indicated that the differentially expressed miRNAs were primarily involved in various biological processes related to gene expression and transcription, cell development and metabolism, protein modification and kinase activity regulation, as well as multiple signaling pathways such as PI3K/Akt signaling pathway. This study provided a global view of miRNA expression in plasma from OBI patients. These differentially expressed miRNAs might play important roles in the development of OBI, which provided intriguing insights into the screening and molecular mechanism of OBI.
© 2019 Wiley Periodicals, Inc.

Entities:  

Keywords:  bioinformatics; hepatitis B virus; miRNA sequencing; miRNAs; occult infection

Mesh:

Substances:

Year:  2019        PMID: 31513283     DOI: 10.1002/jmv.25594

Source DB:  PubMed          Journal:  J Med Virol        ISSN: 0146-6615            Impact factor:   2.327


  4 in total

Review 1.  Occult hepatitis B - the result of the host immune response interaction with different genomic expressions of the virus.

Authors:  George Sebastian Gherlan
Journal:  World J Clin Cases       Date:  2022-06-16       Impact factor: 1.534

2.  ROS-Related miRNAs Regulate Immune Response and Chemoradiotherapy Sensitivity in Hepatocellular Carcinoma by Comprehensive Analysis and Experiment.

Authors:  Yangtao Xu; Xiaoqin He; Junjian Deng; Lin Xiong; Biao Chen; Jiayu Chen; Xiaoyu Zhang; Wenliang Chen; Xin Liu; Xinyao Hu; Jiayi Li; Shan Jiang; Yang Shen; Ximing Xu
Journal:  Oxid Med Cell Longev       Date:  2022-05-09       Impact factor: 7.310

3.  Identification and characterization of lncRNA AP000253 in occult hepatitis B virus infection.

Authors:  Qingqin Hao; Zheng Wang; Qinghui Wang; Bo Chen; Huizhong Qian; Xiao Liu; Hong Cao; Wei Xia; Jian Jiang; Zhonghua Lu
Journal:  Virol J       Date:  2021-06-10       Impact factor: 4.099

4.  Screening of long non-coding RNAs markers in plasma of children with chronic gastritis.

Authors:  Zhen Gu; Hua-Qin Shen; Pei-Hua Fu; Mei Chen
Journal:  Chronic Dis Transl Med       Date:  2020-02-10
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.