Literature DB >> 31510188

Divide and conquer: real-time maximum likelihood fitting of multiple emitters for super-resolution localization microscopy.

Luchang Li, Bo Xin, Weibing Kuang, Zhiwei Zhou, Zhen-Li Huang.   

Abstract

Multi-emitter localization has great potential for maximizing the imaging speed of super-resolution localization microscopy. However, the slow image analysis speed of reported multi-emitter localization algorithms limits their usage in mostly off-line image processing with small image size. Here we adopt the well-known divide and conquer strategy in computer science and present a fitting-based method called QC-STORM for fast multi-emitter localization. Using simulated and experimental data, we verify that QC-STORM is capable of providing real-time full image processing on raw images with 100 µm × 100 µm field of view and 10 ms exposure time, with comparable spatial resolution as the popular fitting-based ThunderSTORM and the up-to-date non-iterative WindSTORM. This study pushes the development and practical use of super-resolution localization microscopy in high-throughput or high-content imaging of cell-to-cell differences or discovering rare events in a large cell population.

Year:  2019        PMID: 31510188     DOI: 10.1364/OE.27.021029

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  8 in total

1.  PCIe-based FPGA-GPU heterogeneous computation for real-time multi-emitter fitting in super-resolution localization microscopy.

Authors:  Dan Gui; Yunjiu Chen; Weibing Kuang; Mingtao Shang; Yingjun Zhang; Zhen-Li Huang
Journal:  Biomed Opt Express       Date:  2022-05-16       Impact factor: 3.562

2.  Estimating the dynamic range of quantitative single-molecule localization microscopy.

Authors:  Daniel F Nino; Joshua N Milstein
Journal:  Biophys J       Date:  2021-08-24       Impact factor: 3.699

3.  LuckyProfiler: an ImageJ plug-in capable of quantifying FWHM resolution easily and effectively for super-resolution images.

Authors:  Mengting Li; Qihang Song; Yinghao Xiao; Junnan Wu; Weibing Kuang; Yingjun Zhang; Zhen-Li Huang
Journal:  Biomed Opt Express       Date:  2022-07-25       Impact factor: 3.562

Review 4.  Super-resolution Microscopy with Single Molecules in Biology and Beyond-Essentials, Current Trends, and Future Challenges.

Authors:  Leonhard Möckl; W E Moerner
Journal:  J Am Chem Soc       Date:  2020-10-09       Impact factor: 15.419

5.  Comparing Super-Resolution Microscopy Techniques to Analyze Chromosomes.

Authors:  Ivona Kubalová; Alžběta Němečková; Klaus Weisshart; Eva Hřibová; Veit Schubert
Journal:  Int J Mol Sci       Date:  2021-02-14       Impact factor: 5.923

Review 6.  Can super-resolution microscopy become a standard characterization technique for materials chemistry?

Authors:  Shikha Dhiman; Teodora Andrian; Beatriz Santiago Gonzalez; Marrit M E Tholen; Yuyang Wang; Lorenzo Albertazzi
Journal:  Chem Sci       Date:  2021-12-01       Impact factor: 9.825

Review 7.  Probing Chromatin Compaction and Its Epigenetic States in situ With Single-Molecule Localization-Based Super-Resolution Microscopy.

Authors:  Jianquan Xu; Yang Liu
Journal:  Front Cell Dev Biol       Date:  2021-06-10

Review 8.  State-of-the-Art Approaches for Image Deconvolution Problems, including Modern Deep Learning Architectures.

Authors:  Mikhail Makarkin; Daniil Bratashov
Journal:  Micromachines (Basel)       Date:  2021-12-14       Impact factor: 2.891

  8 in total

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