| Literature DB >> 31509055 |
S Cormican1, D M Connaughton1,2,3, C Kennedy1,4, S Murray1,4, M Živná5, S Kmoch5, N K Fennelly6, P O'Kelly1, K A Benson1,4, E T Conlon1, G Cavalleri4, C Foley3,7, B Doyle6, A Dorman6, M A Little3,8, P Lavin8, K Kidd9, A J Bleyer9, P J Conlon1,4.
Abstract
Introduction: Autosomal dominant tubulointerstitial kidney disease (ADTKD) is a rare genetic cause of renal impairment resulting from mutations in the MUC1, UMOD, HNF1B, REN, and SEC61A1 genes. Neither the national or global prevalence of these diseases has been determined. We aimed to establish a database of patients with ADTKD in Ireland and report the clinical and genetic characteristics of these families.Entities:
Keywords: ADTKD; HNF-1B; MUC-1; UMOD; chronic kidney disease; frameshift; genetic; urinary smear
Mesh:
Substances:
Year: 2019 PMID: 31509055 PMCID: PMC6746258 DOI: 10.1080/0886022X.2019.1655452
Source DB: PubMed Journal: Ren Fail ISSN: 0886-022X Impact factor: 2.606
KDIGO criteria for suspected and definite diagnosis of ADTKD which were used to define inclusion in our study.
| Suspected diagnosis | Confirmed diagnosis |
|---|---|
| Family history of autosomal dominant inheritance of CKD with clinical characteristics in keeping with ADTKD | Compatible family history (minimum of 1 first degree relative) and compatible kidney biopsy in one affected individual |
| Without a compatible family history – compatible histology on a kidney biopsy of compatible extra-renal mutations e.g., Gout or Diabetes | Demonstrated mutation in one of the 4 known genes ( |
ADTKD: autosomal dominant tubulointerstitial kidney disease; CKD: chronic kidney disease.
Figure 1.Flow chart demonstrating recruitment to this cohort and methods of genetic testing for ADTKD. Sixteen families have been identified with a total solve rate of 12/16. Individuals with tubulointerstitial kidney disease and a relevant family history identified from the Irish Kidney Gene Project (IKGP) were further screened via review of biopsy reports and clinical records. Five individuals were excluded from this report because they did not meet KDIGO criteria for a definite diagnosis of ADTKD, 3 because they did not have an affected first degree relative (or confirmed mutation) and 2 because they did not have a compatible biopsy report (or confirmed mutation). The Renal Genetics Clinic (RGC) was an additional source of recruitment. *Two families recruited via the RGC went directly to gene panel testing without prior targeted testing for MUC1 and UMOD mutations. †One individual had both gene panel and whole exome sequencing and was found to have a pathogenic mutation in the UMOD gene on both methods.
Figure 2.Frequency of each genetic subtype of ADTKD within this Irish cohort. MUC1: ADTKD-MUC1; UMOD: ADTKD-UMOD; HNF1B: ADTKD-HNF1B; NOS: not otherwise specified.
Clinical characteristics of individuals in this cohort by ADTKD-subgroup.
| ADTKD (All) | ADTKD- | ADTKD- | ADTKD- | ADTKD-NOS | ||
|---|---|---|---|---|---|---|
| Confirmed mutation | 28 (52%) | 15 | 9 (48%) | 7 (100%) | 0 (0%) | NA |
| Number of families | 16 | 5 | 5 | 2 | 4 | NA |
| Mean age at presentation, years (SD) | 38 (16.0) | 37.0 (12.8) | 35.3 (18.3) | 38.6 (14.5) | 57.25 (12.0) | 0.090 |
| Mean creatinine at presentation, µmol/l (SD) | 210.6 (163.5) | 136.4 (45.6) | 272 (217.2) | 171 (20.4) | 372 (214.0) | 0.030 |
| Number reached ESRD (%) | 32 (59%) | 12 (52%) | 12 (63%) | 5 (71%) | 3 (56%) | NA |
| Mean age at ESRD, years | 47.4 ( 16.0) | 44.5 (11.47) | 46.9 (17.8) | 46.8 (20.5) | 68.0 (5.7) | 0.303 |
| Gout (%) | 15/54 (27%) | 0% (0/19) | 68% (13/19) | 14% (1/7) | 20% (1/5) | <0.001 |
ADTKD: autosomal dominant tubulointerstitial kidney disease; ESRD: end stage renal disease; n: Number; NA: non-applicable; SD: standard deviation. *For two individuals in this group, diagnosis was based on urinary detection of MUC1fs protein in urinary smears; **p Values by one-way ANOVA testing comparing ADTKD sub-categories; ***p Values by chi-square testing comparing ADTKD sub-categories.
Figure 3.(a) Age at presentation and (b) Age at end stage renal disease (ESRD) by genetic category of ADTKD. MUC1: ADTKD-MUC1; UMOD: ADTKD-UMOD; HNF1B: ADTKD-HNF1B; NOS: not otherwise specified.
Figure 4.Family tree demonstrating a large Irish family with cases of ADTKD over four generations due to MUC1 genetic mutations. Shaded = Affected; Unshaded = Unaffected; Box = Male; Circle = Female; Strikethrough = Deceased.
Each family included in this cohort showing genetic mutation identified. Details of numbers of affected individuals with confirmed mutation and compatible biopsy are shown. The number of 1st degree relatives affected is shown for the ADTKD-NOS families.
| Family number | ADTKD category | Genetic mutation | Protein | Testing laboratory | Number individuals in family | Number with confirmed mutation | Number with compatible renal biopsy | Number 1st degree relatives (ADTKD-NOS) |
|---|---|---|---|---|---|---|---|---|
| Insertion in VNTR region | frameshift | BI | 13 | 7 | 5 | |||
| Insertion in VNTR region | frameshift | BI | 4 | 2 | 0 | |||
| Insertion in VNTR region | frameshift | BI | 2 | 1 | 1 | |||
| NA | frameshift | CU | 3 | 0 | 2 | |||
| NA | frameshift | CU | 1 | 0 | 1 | |||
| c.821A > G | p.Y274C | BG | 2 | 2 | 1 | |||
| c.668G > A | p.C223Y | BG | 5 | 3 | 4 | |||
| c.317G > A | p.C106Y | BG | 7 | 2 | 1 | |||
| c.1382C > A | p.A461E | BCH | 4 | 1 | 1 | |||
| c.280T > C | p.C94R | BCH/RCSI | 1 | 1 | 0 | |||
| c.1333_1334delGC | p.Ala445fs | BCH | 4 | 4 | 2 | |||
| c.544 + 3_544 + 6 | Del 75% ESS | BCH | 3 | 3 | 0 | |||
| NOS | NA | NA | NA | 2 | 0 | 1 | 2 | |
| NOS | NA | NA | NA | 1 | 0 | 1 | 1 | |
| NOS | NA | NA | NA | 1 | 0 | 1 | 2 | |
| NOS | NA | NA | NA | 1 | 0 | 1 | 2 |
ADTKD: autosomal dominant tubulointerstitial kidney disease; BCH: Boston Children’s Hospital; BI: broad institute; BG: Bowman Grey Institute; CU: Charles University, Prague; del: deletion; ESS: essential splice site; fs: frameshift; NA: non-applicable; RCSI: Royal College of Surgeons Ireland (gene panel analysis); VUS: variant of uncertain significance. *Urinary MUC1fs protein detected, no detected genetic mutation to date; **Mutation identified in both centres.
Figure 5.Family tree demonstrating a large Irish family with cases of ADTKD over four generations due to UMOD mutations. Shaded = Affected; Unshaded = Unaffected; Square within a circle = Status Unknown; Box = Male; Circle = Female; Strikethrough = Deceased.