Literature DB >> 31505439

Structural insights for vanadium catecholates and iron‑sulfur clusters obtained from multiple data analysis methods applied to electron spin relaxation data.

Thacien Ngendahimana1, Richard Ayikpoe1, John A Latham1, Gareth R Eaton1, Sandra S Eaton2.   

Abstract

Electron paramagnetic resonance (EPR) inversion recovery curves for vanadium catecholates and ironsulfur clusters were analyzed with three models: the sum of two exponentials, a stretched exponential, and a model-free distribution of exponentials (UPEN). For all data sets studied fits with a stretched exponential were statistically indistinguishable from the sum of two exponentials, and were significantly better than for single exponentials. UPEN provides insights into the structures of the distributions. For a vanadium(IV) tris catecholate the distribution of relaxation rates calculated with UPEN shows the contribution from spectral diffusion at low temperatures. The energy of the local mode for this complex, found from the temperature dependence of the spin lattice relaxation, is consistent with values expected for a metal-ligand vibration. For the [2Fe-2S]+ cluster in pyruvate formate lyase activating enzyme (PFL-AE) the small stretched exponential β values (0.3) at low temperature and the distributions calculated with UPEN reflect the contribution from a second rapidly relaxing species that could be difficult to detect by continuous wave EPR. The distributions in 1/T1 for the [4Fe-4S]+ clusters in Mycofactocin maturase were about a factor of four wider than for the three other systems studied. The very broad distribution of relaxation rates may be due to protein mobility and distributions in electronic energies and local environments for the clusters. UPEN provides insight into several situations that can result in low values of stretch parameter β including contributions from spectral diffusion, overlapping signals from distinguishable clusters, or very wide distributions.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Distribution of exponentials; Hydrogenase maturase; Iron‑sulfur clusters; Mycofactocin maturase; Pyruvate formate lyase activating enzyme; Vanadium(IV) catecholate

Mesh:

Substances:

Year:  2019        PMID: 31505439      PMCID: PMC6859209          DOI: 10.1016/j.jinorgbio.2019.110806

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  23 in total

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2.  Structure and dynamics of S3(-) radicals in ultramarine-type pigment based on zeolite A: electron spin resonance and electron spin echo studies.

Authors:  Janina Goslar; Stefan Lijewski; Stanisław K Hoffmann; Aldona Jankowska; Stanisław Kowalak
Journal:  J Chem Phys       Date:  2009-05-28       Impact factor: 3.488

3.  A comparison of continuous distributions of parameters of exponential decay curves.

Authors:  R G Rossing; M B Danford
Journal:  Biometrics       Date:  1968-03       Impact factor: 2.571

4.  Structural Effects on the Spin Dynamics of Potential Molecular Qubits.

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Journal:  Inorg Chem       Date:  2017-12-27       Impact factor: 5.165

5.  Electron spin-lattice relaxation of the [Cu(1.5) ... Cu(1.5)] dinuclear copper center in nitrous oxide reductase.

Authors:  S Pfenninger; W E Antholine; M E Barr; J S Hyde; P M Kroneck; W G Zumft
Journal:  Biophys J       Date:  1995-12       Impact factor: 4.033

6.  Impact of mutations on the midpoint potential of the [4Fe-4S]+1,+2 cluster and on catalytic activity in electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO).

Authors:  Robert J Usselman; Alistair J Fielding; Frank E Frerman; Nicholas J Watmough; Gareth R Eaton; Sandra S Eaton
Journal:  Biochemistry       Date:  2007-12-11       Impact factor: 3.162

7.  A Rare Example of Four-Coordinate Nonoxido Vanadium(IV) Alkoxide in the Solid State: Structure, Spectroscopy, and Magnetization Dynamics.

Authors:  Danilo Stinghen; Matteo Atzori; Caprici M Fernandes; Ronny R Ribeiro; Eduardo L de Sá; Davi F Back; Siddhartha O K Giese; David L Hughes; Giovana G Nunes; Elena Morra; Mario Chiesa; Roberta Sessoli; Jaísa F Soares
Journal:  Inorg Chem       Date:  2018-08-30       Impact factor: 5.165

8.  Quantum Coherence Times Enhancement in Vanadium(IV)-based Potential Molecular Qubits: the Key Role of the Vanadyl Moiety.

Authors:  Matteo Atzori; Elena Morra; Lorenzo Tesi; Andrea Albino; Mario Chiesa; Lorenzo Sorace; Roberta Sessoli
Journal:  J Am Chem Soc       Date:  2016-08-26       Impact factor: 15.419

9.  Electron Spin Relaxation and Biochemical Characterization of the Hydrogenase Maturase HydF: Insights into [2Fe-2S] and [4Fe-4S] Cluster Communication and Hydrogenase Activation.

Authors:  Eric M Shepard; Amanda S Byer; Priyanka Aggarwal; Jeremiah N Betz; Anna G Scott; Krista A Shisler; Robert J Usselman; Gareth R Eaton; Sandra S Eaton; Joan B Broderick
Journal:  Biochemistry       Date:  2017-06-13       Impact factor: 3.162

10.  Quantum coherence in a processable vanadyl complex: new tools for the search of molecular spin qubits.

Authors:  Lorenzo Tesi; Eva Lucaccini; Irene Cimatti; Mauro Perfetti; Matteo Mannini; Matteo Atzori; Elena Morra; Mario Chiesa; Andrea Caneschi; Lorenzo Sorace; Roberta Sessoli
Journal:  Chem Sci       Date:  2015-12-11       Impact factor: 9.825

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  3 in total

1.  Spin-spin interaction and relaxation in two trityl-nitroxide diradicals.

Authors:  Whylder Moore; Ru Yao; Yangping Liu; Sandra S Eaton; Gareth R Eaton
Journal:  J Magn Reson       Date:  2021-10-01       Impact factor: 2.229

2.  Impact of Chlorine Substitution on Electron Spin Relaxation of a Trityl Radical.

Authors:  Whylder Moore; Justin L Huffman; Benoit Driesschaert; Sandra S Eaton; Gareth R Eaton
Journal:  Appl Magn Reson       Date:  2021-08-12       Impact factor: 0.974

3.  Electron Spin Relaxation of Tb3+ and Tm3+ Ions.

Authors:  Joseph McPeak; Dinu Alexander; Cyriac Joseph; Sandra S Eaton; Gareth R Eaton
Journal:  Appl Magn Reson       Date:  2020-09-14       Impact factor: 0.831

  3 in total

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