Literature DB >> 31505245

Comparison of Deep Learning-Based and Patch-Based Methods for Pseudo-CT Generation in MRI-Based Prostate Dose Planning.

Axel Largent1, Anaïs Barateau2, Jean-Claude Nunes2, Eugenia Mylona2, Joël Castelli2, Caroline Lafond2, Peter B Greer3, Jason A Dowling4, John Baxter2, Hervé Saint-Jalmes2, Oscar Acosta2, Renaud de Crevoisier2.   

Abstract

PURPOSE: Deep learning methods (DLMs) have recently been proposed to generate pseudo-CT (pCT) for magnetic resonance imaging (MRI) based dose planning. This study aims to evaluate and compare DLMs (U-Net and generative adversarial network [GAN]) using various loss functions (L2, single-scale perceptual loss [PL], multiscale PL, weighted multiscale PL) and a patch-based method (PBM). METHODS AND MATERIALS: Thirty-nine patients received a volumetric modulated arc therapy for prostate cancer (78 Gy). T2-weighted MRIs were acquired in addition to planning CTs. The pCTs were generated from the MRIs using 7 configurations: 4 GANs (L2, single-scale PL, multiscale PL, weighted multiscale PL), 2 U-Net (L2 and single-scale PL), and the PBM. The imaging endpoints were mean absolute error and mean error, in Hounsfield units, between the reference CT (CTref) and the pCT. Dose uncertainties were quantified as mean absolute differences between the dose volume histograms (DVHs) calculated from the CTref and pCT obtained by each method. Three-dimensional gamma indexes were analyzed.
RESULTS: Considering the image uncertainties in the whole pelvis, GAN L2 and U-Net L2 showed the lowest mean absolute error (≤34.4 Hounsfield units). The mean errors were not different than 0 (P ≤ .05). The PBM provided the highest uncertainties. Very few DVH points differed when comparing GAN L2 or U-Net L2 DVHs and CTref DVHs (P ≤ .05). Their dose uncertainties were ≤0.6% for the prostate planning target Volume V95%, ≤0.5% for the rectum V70Gy, and ≤0.1% for the bladder V50Gy. The PBM, U-Net PL, and GAN PL presented the highest systematic dose uncertainties. The gamma pass rates were >99% for all DLMs. The mean calculation time to generate 1 pCT was 15 s for the DLMs and 62 min for the PBM.
CONCLUSIONS: Generating pCT for MRI dose planning with DLMs and PBM provided low-dose uncertainties. In particular, the GAN L2 and U-Net L2 provided the lowest dose uncertainties together with a low computation time. Crown
Copyright © 2019. Published by Elsevier Inc. All rights reserved.

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Year:  2019        PMID: 31505245     DOI: 10.1016/j.ijrobp.2019.08.049

Source DB:  PubMed          Journal:  Int J Radiat Oncol Biol Phys        ISSN: 0360-3016            Impact factor:   7.038


  9 in total

Review 1.  A Survey on Deep Learning for Precision Oncology.

Authors:  Ching-Wei Wang; Muhammad-Adil Khalil; Nabila Puspita Firdi
Journal:  Diagnostics (Basel)       Date:  2022-06-17

2.  Synthetic CT generation from weakly paired MR images using cycle-consistent GAN for MR-guided radiotherapy.

Authors:  Seung Kwan Kang; Hyun Joon An; Hyeongmin Jin; Jung-In Kim; Eui Kyu Chie; Jong Min Park; Jae Sung Lee
Journal:  Biomed Eng Lett       Date:  2021-06-19

Review 3.  A review on medical imaging synthesis using deep learning and its clinical applications.

Authors:  Tonghe Wang; Yang Lei; Yabo Fu; Jacob F Wynne; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  J Appl Clin Med Phys       Date:  2020-12-11       Impact factor: 2.102

4.  Comparison of Two-Dimensional- and Three-Dimensional-Based U-Net Architectures for Brain Tissue Classification in One-Dimensional Brain CT.

Authors:  Meera Srikrishna; Rolf A Heckemann; Joana B Pereira; Giovanni Volpe; Anna Zettergren; Silke Kern; Eric Westman; Ingmar Skoog; Michael Schöll
Journal:  Front Comput Neurosci       Date:  2022-01-10       Impact factor: 2.380

5.  MRI-Only Radiotherapy Planning for Nasopharyngeal Carcinoma Using Deep Learning.

Authors:  Xiangyu Ma; Xinyuan Chen; Jingwen Li; Yu Wang; Kuo Men; Jianrong Dai
Journal:  Front Oncol       Date:  2021-09-08       Impact factor: 6.244

6.  Comparison of Synthetic Computed Tomography Generation Methods, Incorporating Male and Female Anatomical Differences, for Magnetic Resonance Imaging-Only Definitive Pelvic Radiotherapy.

Authors:  Laura M O'Connor; Jae H Choi; Jason A Dowling; Helen Warren-Forward; Jarad Martin; Peter B Greer
Journal:  Front Oncol       Date:  2022-02-08       Impact factor: 6.244

7.  Automatic brain segmentation in preterm infants with post-hemorrhagic hydrocephalus using 3D Bayesian U-Net.

Authors:  Axel Largent; Josepheen De Asis-Cruz; Kushal Kapse; Scott D Barnett; Jonathan Murnick; Sudeepta Basu; Nicole Andersen; Stephanie Norman; Nickie Andescavage; Catherine Limperopoulos
Journal:  Hum Brain Mapp       Date:  2022-01-13       Impact factor: 5.038

8.  Synthetic CT generation for MRI-guided adaptive radiotherapy in prostate cancer.

Authors:  Shu-Hui Hsu; Zhaohui Han; Jonathan E Leeman; Yue-Houng Hu; Raymond H Mak; Atchar Sudhyadhom
Journal:  Front Oncol       Date:  2022-09-23       Impact factor: 5.738

Review 9.  Applications of artificial intelligence and deep learning in molecular imaging and radiotherapy.

Authors:  Hossein Arabi; Habib Zaidi
Journal:  Eur J Hybrid Imaging       Date:  2020-09-23
  9 in total

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