Literature DB >> 31502165

Overview of Tissue Imaging Methods.

Sanjay S Patel1, Scott J Rodig2.   

Abstract

The rapidly evolving fields of precision medicine and immuno-oncology are together driving an increasing need for detailed investigation of the tumor immune microenvironment (TIME) in a variety of solid tumors and hematologic neoplasms. The development of targeted therapies that may be efficacious in reprogramming the host immune response to recognize and eliminate tumor cells requires accurate identification of the various inflammatory cells and the spatial relationships between them within the TIME. While currently established techniques enable diagnostic pathologists to routinely interrogate for up to two protein markers and evaluate their expression by visual examination, there is a growing need to reliably query many more targets (i.e., multiplexing) simultaneously in a given tissue specimen, in order to more precisely characterize and distinguish the TIMEs between different tumor types, and between patients. Several technologies aimed at achieving these goals, including multiplex colorimetric immunohistochemistry (mCIHC), multiplex immunofluorescence (mIF), cyclic immunofluorescence (CycIF), multiplexed ion beam imaging (MIBI), codetection by indexing (CODEX), and digital spatial profiling (DSP), are discussed.

Entities:  

Keywords:  Immune microenvironment; Immuno-oncology; Immunofluorescence; Immunohistochemistry; Multiplex imaging

Mesh:

Substances:

Year:  2020        PMID: 31502165     DOI: 10.1007/978-1-4939-9773-2_21

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  8 in total

Review 1.  Design and application of single-cell RNA sequencing to study kidney immune cells in lupus nephritis.

Authors:  Deepak A Rao; Arnon Arazi; David Wofsy; Betty Diamond
Journal:  Nat Rev Nephrol       Date:  2019-12-18       Impact factor: 28.314

2.  Tyramide-conjugated DNA barcodes enable signal amplification for multiparametric CODEX imaging.

Authors:  Paul D Simonson; Itzel Valencia; Sanjay S Patel
Journal:  Commun Biol       Date:  2022-06-27

3.  A Simple Method for Creating a High-Content Microscope for Imaging Multiplexed Tissue Microarrays.

Authors:  Shabnam Abtahi; Neal R Gliksman; John F Heneghan; Steven P Nilsen; Jeremy L Muhlich; Jay Copeland; Emil Rozbicki; Chris Allan; Pradeep K Dudeja; Jerrold R Turner
Journal:  Curr Protoc       Date:  2021-04

4.  Highly multiplexed 2-dimensional imaging mass cytometry analysis of HBV-infected liver.

Authors:  Daniel Traum; Yue J Wang; Kathleen B Schwarz; Jonathan Schug; David Kh Wong; Harry LA Janssen; Norah A Terrault; Mandana Khalili; Abdus S Wahed; Karen F Murray; Phillip Rosenthal; Simon C Ling; Norberto Rodriguez-Baez; Richard K Sterling; Daryl Ty Lau; Timothy M Block; Michael D Feldman; Elizabeth E Furth; William M Lee; David E Kleiner; Anna S Lok; Klaus H Kaestner; Kyong-Mi Chang
Journal:  JCI Insight       Date:  2021-04-08

5.  PKCλ/ι inhibition activates an ULK2-mediated interferon response to repress tumorigenesis.

Authors:  Juan F Linares; Xiao Zhang; Anxo Martinez-Ordoñez; Angeles Duran; Hiroto Kinoshita; Hiroaki Kasashima; Naoko Nakanishi; Yuki Nakanishi; Ryan Carelli; Luca Cappelli; Esperanza Arias; Masakazu Yashiro; Masaichi Ohira; Sanjay Patel; Giorgio Inghirami; Massimo Loda; Ana Maria Cuervo; Maria T Diaz-Meco; Jorge Moscat
Journal:  Mol Cell       Date:  2021-09-23       Impact factor: 17.970

6.  Inter- and intra-tumor heterogeneity of metastatic prostate cancer determined by digital spatial gene expression profiling.

Authors:  Lauren Brady; Michelle Kriner; Ilsa Coleman; Colm Morrissey; Martine Roudier; Lawrence D True; Roman Gulati; Stephen R Plymate; Zoey Zhou; Brian Birditt; Rhonda Meredith; Gary Geiss; Margaret Hoang; Joseph Beechem; Peter S Nelson
Journal:  Nat Commun       Date:  2021-03-03       Impact factor: 14.919

7.  In Vivo Click Chemistry Enables Multiplexed Intravital Microscopy.

Authors:  Jina Ko; Kilean Lucas; Rainer Kohler; Elias A Halabi; Martin Wilkovitsch; Jonathan C T Carlson; Ralph Weissleder
Journal:  Adv Sci (Weinh)       Date:  2022-06-24       Impact factor: 17.521

8.  Improvement of the Similarity Spectral Unmixing Approach for Multiplexed Two-Photon Imaging by Linear Dimension Reduction of the Mixing Matrix.

Authors:  Asylkhan Rakhymzhan; Andreas Acs; Anja E Hauser; Thomas H Winkler; Raluca A Niesner
Journal:  Int J Mol Sci       Date:  2021-06-03       Impact factor: 5.923

  8 in total

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