Literature DB >> 31499320

RMDL: Recalibrated multi-instance deep learning for whole slide gastric image classification.

Shujun Wang1, Yaxi Zhu2, Lequan Yu1, Hao Chen3, Huangjing Lin4, Xiangbo Wan5, Xinjuan Fan6, Pheng-Ann Heng1.   

Abstract

The whole slide histopathology images (WSIs) play a critical role in gastric cancer diagnosis. However, due to the large scale of WSIs and various sizes of the abnormal area, how to select informative regions and analyze them are quite challenging during the automatic diagnosis process. The multi-instance learning based on the most discriminative instances can be of great benefit for whole slide gastric image diagnosis. In this paper, we design a recalibrated multi-instance deep learning method (RMDL) to address this challenging problem. We first select the discriminative instances, and then utilize these instances to diagnose diseases based on the proposed RMDL approach. The designed RMDL network is capable of capturing instance-wise dependencies and recalibrating instance features according to the importance coefficient learned from the fused features. Furthermore, we build a large whole-slide gastric histopathology image dataset with detailed pixel-level annotations. Experimental results on the constructed gastric dataset demonstrate the significant improvement on the accuracy of our proposed framework compared with other state-of-the-art multi-instance learning methods. Moreover, our method is general and can be extended to other diagnosis tasks of different cancer types based on WSIs.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Gastric cancer; Multi-instance learning; Recalibration mechanism; Whole slide image analysis

Mesh:

Year:  2019        PMID: 31499320     DOI: 10.1016/j.media.2019.101549

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  22 in total

1.  Using Multi-Scale Convolutional Neural Network Based on Multi-Instance Learning to Predict the Efficacy of Neoadjuvant Chemoradiotherapy for Rectal Cancer.

Authors:  Dehai Zhang; Yongchun Duan; Jing Guo; Yaowei Wang; Yun Yang; Zhenhui Li; Kelong Wang; Lin Wu; Minghao Yu
Journal:  IEEE J Transl Eng Health Med       Date:  2022-03-03       Impact factor: 3.316

2.  Cascaded-Recalibrated Multiple Instance Deep Model for Pathologic-Level Lung Cancer Prediction in CT Images.

Authors:  Qingfeng Wang; Ying Zhou; Jun Huang; Zhiqin Liu; Weidong Zhang; Qiyu Liu; Jie-Zhi Cheng
Journal:  Comput Intell Neurosci       Date:  2022-06-13

3.  Automatic Whole Slide Pathology Image Diagnosis Framework via Unit Stochastic Selection and Attention Fusion.

Authors:  Pingjun Chen; Yun Liang; Xiaoshuang Shi; Lin Yang; Paul Gader
Journal:  Neurocomputing       Date:  2021-01-23       Impact factor: 5.779

4.  A multi-resolution model for histopathology image classification and localization with multiple instance learning.

Authors:  Jiayun Li; Wenyuan Li; Anthony Sisk; Huihui Ye; W Dean Wallace; William Speier; Corey W Arnold
Journal:  Comput Biol Med       Date:  2021-02-10       Impact factor: 4.589

5.  Data-efficient and weakly supervised computational pathology on whole-slide images.

Authors:  Drew F K Williamson; Tiffany Y Chen; Ming Y Lu; Richard J Chen; Matteo Barbieri; Faisal Mahmood
Journal:  Nat Biomed Eng       Date:  2021-03-01       Impact factor: 25.671

6.  A fast and effective detection framework for whole-slide histopathology image analysis.

Authors:  Jun Ruan; Zhikui Zhu; Chenchen Wu; Guanglu Ye; Jingfan Zhou; Junqiu Yue
Journal:  PLoS One       Date:  2021-05-12       Impact factor: 3.240

7.  Subtype classification of malignant lymphoma using immunohistochemical staining pattern.

Authors:  Noriaki Hashimoto; Kaho Ko; Tatsuya Yokota; Kei Kohno; Masato Nakaguro; Shigeo Nakamura; Ichiro Takeuchi; Hidekata Hontani
Journal:  Int J Comput Assist Radiol Surg       Date:  2022-02-11       Impact factor: 3.421

8.  Development and evaluation of a deep neural network for histologic classification of renal cell carcinoma on biopsy and surgical resection slides.

Authors:  Mengdan Zhu; Bing Ren; Ryland Richards; Matthew Suriawinata; Naofumi Tomita; Saeed Hassanpour
Journal:  Sci Rep       Date:  2021-03-29       Impact factor: 4.379

Review 9.  A State-of-the-Art Review for Gastric Histopathology Image Analysis Approaches and Future Development.

Authors:  Shiliang Ai; Chen Li; Xiaoyan Li; Tao Jiang; Marcin Grzegorzek; Changhao Sun; Md Mamunur Rahaman; Jinghua Zhang; Yudong Yao; Hong Li
Journal:  Biomed Res Int       Date:  2021-06-26       Impact factor: 3.411

10.  Deep Learning Models for Gastric Signet Ring Cell Carcinoma Classification in Whole Slide Images.

Authors:  Fahdi Kanavati; Shin Ichihara; Michael Rambeau; Osamu Iizuka; Koji Arihiro; Masayuki Tsuneki
Journal:  Technol Cancer Res Treat       Date:  2021 Jan-Dec
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