Literature DB >> 31492649

A Molecular Signature in Blood Reveals a Role for p53 in Regulating Malaria-Induced Inflammation.

Tuan M Tran1, Rajan Guha2, Silvia Portugal3, Jeff Skinner2, Aissata Ongoiba4, Jyoti Bhardwaj5, Marcus Jones6, Jacqueline Moebius2, Pratap Venepally6, Safiatou Doumbo4, Elizabeth A DeRiso7, Shanping Li2, Kamalakannan Vijayan8, Sarah L Anzick9, Geoffrey T Hart10, Elise M O'Connell11, Ogobara K Doumbo4, Alexis Kaushansky8, Galit Alter7, Phillip L Felgner12, Hernan Lorenzi13, Kassoum Kayentao4, Boubacar Traore4, Ewen F Kirkness6, Peter D Crompton14.   

Abstract

Immunity that controls parasitemia and inflammation during Plasmodium falciparum (Pf) malaria can be acquired with repeated infections. A limited understanding of this complex immune response impedes the development of vaccines and adjunctive therapies. We conducted a prospective systems biology study of children who differed in their ability to control parasitemia and fever following Pf infection. By integrating whole-blood transcriptomics, flow-cytometric analysis, and plasma cytokine and antibody profiles, we demonstrate that a pre-infection signature of B cell enrichment, upregulation of T helper type 1 (Th1) and Th2 cell-associated pathways, including interferon responses, and p53 activation associated with control of malarial fever and coordinated with Pf-specific immunoglobulin G (IgG) and Fc receptor activation to control parasitemia. Our hypothesis-generating approach identified host molecules that may contribute to differential clinical outcomes during Pf infection. As a proof of concept, we have shown that enhanced p53 expression in monocytes attenuated Plasmodium-induced inflammation and predicted protection from fever. Published by Elsevier Inc.

Entities:  

Keywords:  Plasmodium falciparum; RNA sequencing; RNA-seq; antibody profiling; flow cytometry; malaria; malaria immunity; prospective cohort study; systems biology; systems immunology; transcriptomics

Mesh:

Substances:

Year:  2019        PMID: 31492649      PMCID: PMC7163400          DOI: 10.1016/j.immuni.2019.08.009

Source DB:  PubMed          Journal:  Immunity        ISSN: 1074-7613            Impact factor:   31.745


  65 in total

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2.  Gamma-globulin and acquired immunity to human malaria.

Authors:  S COHEN; I A McGREGOR; S CARRINGTON
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3.  Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks.

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5.  Genomewide analysis of the host response to malaria in Kenyan children.

Authors:  Michael J Griffiths; Mohammed J Shafi; Stephen J Popper; Cheryl A Hemingway; Moses M Kortok; Andrew Wathen; Kirk A Rockett; Richard Mott; Michael Levin; Charles R Newton; Kevin Marsh; David A Relman; Dominic P Kwiatkowski
Journal:  J Infect Dis       Date:  2005-04-14       Impact factor: 5.226

6.  Physical association between the high-affinity IgG receptor (Fc gamma RI) and the gamma subunit of the high-affinity IgE receptor (Fc epsilon RI gamma).

Authors:  P R Scholl; R S Geha
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-01       Impact factor: 11.205

7.  The Molecular Signatures Database (MSigDB) hallmark gene set collection.

Authors:  Arthur Liberzon; Chet Birger; Helga Thorvaldsdóttir; Mahmoud Ghandi; Jill P Mesirov; Pablo Tamayo
Journal:  Cell Syst       Date:  2015-12-23       Impact factor: 10.304

8.  Repeated clinical malaria episodes are associated with modification of the immune system in children.

Authors:  Yaw Bediako; Rhys Adams; Adam J Reid; John Joseph Valletta; Francis M Ndungu; Jan Sodenkamp; Jedidah Mwacharo; Joyce Mwongeli Ngoi; Domtila Kimani; Oscar Kai; Juliana Wambua; George Nyangweso; Etienne P de Villiers; Mandy Sanders; Magda Ewa Lotkowska; Jing-Wen Lin; Sarah Manni; John W G Addy; Mario Recker; Chris Newbold; Matthew Berriman; Philip Bejon; Kevin Marsh; Jean Langhorne
Journal:  BMC Med       Date:  2019-03-13       Impact factor: 8.775

9.  Human SNP links differential outcomes in inflammatory and infectious disease to a FOXO3-regulated pathway.

Authors:  James C Lee; Marion Espéli; Carl A Anderson; Michelle A Linterman; Joanna M Pocock; Naomi J Williams; Rebecca Roberts; Sebastien Viatte; Bo Fu; Norbert Peshu; Tran Tinh Hien; Nguyen Hoan Phu; Emma Wesley; Cathryn Edwards; Tariq Ahmad; John C Mansfield; Richard Gearry; Sarah Dunstan; Thomas N Williams; Anne Barton; Carola G Vinuesa; Miles Parkes; Paul A Lyons; Kenneth G C Smith
Journal:  Cell       Date:  2013-09-12       Impact factor: 41.582

10.  Counter-flow elutriation of clinical peripheral blood mononuclear cell concentrates for the production of dendritic and T cell therapies.

Authors:  David F Stroncek; Vicki Fellowes; Chauha Pham; Hanh Khuu; Daniel H Fowler; Lauren V Wood; Marianna Sabatino
Journal:  J Transl Med       Date:  2014-09-17       Impact factor: 5.531

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  20 in total

1.  Systems analysis and controlled malaria infection in Europeans and Africans elucidate naturally acquired immunity.

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Journal:  Nat Immunol       Date:  2021-04-22       Impact factor: 25.606

Review 2.  Systems biology of malaria explored with nonhuman primates.

Authors:  Mary R Galinski
Journal:  Malar J       Date:  2022-06-07       Impact factor: 3.469

3.  Molecular profiling reveals features of clinical immunity and immunosuppression in asymptomatic P. falciparum malaria.

Authors:  Stephanie I Studniberg; Lisa J Ioannidis; Retno A S Utami; Leily Trianty; Yang Liao; Waruni Abeysekera; Connie S N Li-Wai-Suen; Halina M Pietrzak; Julie Healer; Agatha M Puspitasari; Dwi Apriyanti; Farah Coutrier; Jeanne R Poespoprodjo; Enny Kenangalem; Benediktus Andries; Pak Prayoga; Novita Sariyanti; Gordon K Smyth; Alan F Cowman; Ric N Price; Rintis Noviyanti; Wei Shi; Alexandra L Garnham; Diana S Hansen
Journal:  Mol Syst Biol       Date:  2022-04       Impact factor: 13.068

Review 4.  The science and medicine of human immunology.

Authors:  Bali Pulendran; Mark M Davis
Journal:  Science       Date:  2020-09-25       Impact factor: 47.728

5.  Immunotranscriptomic profiling the acute and clearance phases of a human challenge dengue virus serotype 2 infection model.

Authors:  John P Hanley; Huy A Tu; Julie A Dragon; Dorothy M Dickson; Roxana Del Rio-Guerra; Scott W Tighe; Korin M Eckstrom; Nicholas Selig; Samuel V Scarpino; Stephen S Whitehead; Anna P Durbin; Kristen K Pierce; Beth D Kirkpatrick; Donna M Rizzo; Seth Frietze; Sean A Diehl
Journal:  Nat Commun       Date:  2021-05-24       Impact factor: 17.694

Review 6.  Decoding the complexities of human malaria through systems immunology.

Authors:  Tuan M Tran; Peter D Crompton
Journal:  Immunol Rev       Date:  2019-11-03       Impact factor: 10.983

7.  Transcriptional profiling and immunophenotyping show sustained activation of blood monocytes in subpatent Plasmodium falciparum infection.

Authors:  Jessica R Loughland; Tonia Woodberry; Matt Field; Dean W Andrew; Arya SheelaNair; Nicholas L Dooley; Kim A Piera; Fiona H Amante; Enny Kenangalem; Ric N Price; Christian R Engwerda; Nicholas M Anstey; James S McCarthy; Michelle J Boyle; Gabriela Minigo
Journal:  Clin Transl Immunology       Date:  2020-06-18

8.  Changing plasma cytokine, chemokine and growth factor profiles upon differing malaria transmission intensities.

Authors:  Ruth Aguilar; Joseph J Campo; Silvia Chicuecue; Pau Cisteró; Alba Català; Leopoldina Luis; Itziar Ubillos; Beatriz Galatas; Pedro Aide; Caterina Guinovart; Gemma Moncunill; Carlota Dobaño
Journal:  Malar J       Date:  2019-12-05       Impact factor: 2.979

9.  Plasmodium falciparum malaria drives epigenetic reprogramming of human monocytes toward a regulatory phenotype.

Authors:  Rajan Guha; Anna Mathioudaki; Safiatou Doumbo; Didier Doumtabe; Jeff Skinner; Gunjan Arora; Shafiuddin Siddiqui; Shanping Li; Kassoum Kayentao; Aissata Ongoiba; Judith Zaugg; Boubacar Traore; Peter D Crompton
Journal:  PLoS Pathog       Date:  2021-04-06       Impact factor: 6.823

10.  Functional human IgA targets a conserved site on malaria sporozoites.

Authors:  Joshua Tan; Hyeseon Cho; Tossapol Pholcharee; Lais S Pereira; Safiatou Doumbo; Didier Doumtabe; Barbara J Flynn; Arne Schön; Sachie Kanatani; Samantha O Aylor; David Oyen; Rachel Vistein; Lawrence Wang; Marlon Dillon; Jeff Skinner; Mary Peterson; Shanping Li; Azza H Idris; Alvaro Molina-Cruz; Ming Zhao; Lisa Renee Olano; Patricia J Lee; Alison Roth; Photini Sinnis; Carolina Barillas-Mury; Kassoum Kayentao; Aissata Ongoiba; Joseph R Francica; Boubacar Traore; Ian A Wilson; Robert A Seder; Peter D Crompton
Journal:  Sci Transl Med       Date:  2021-06-23       Impact factor: 17.956

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