Literature DB >> 31488558

5-formylcytosine and 5-hydroxymethyluracil as surrogate markers of TET2 and SF3B1 mutations in myelodysplastic syndrome, respectively.

Daniel Gackowski1, Maciej Gawronski1, Cassandra Kerr2, Tomas Radivoyevitch3, Ewelina Zarakowska1, Marta Starczak1, Abdulkadir Abakir4, Alexey Ruzov4, Jaroslaw P Maciejewski5, Ryszard Olinski6.   

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Year:  2019        PMID： 31488558      PMCID： PMC7193463          DOI： 10.3324/haematol.2019.224030

Source DB:  PubMed          Journal:  Haematologica        ISSN： 0390-6078            Impact factor:   9.941


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  14 in total

1.  Accurate, Direct, and High-Throughput Analyses of a Broad Spectrum of Endogenously Generated DNA Base Modifications with Isotope-Dilution Two-Dimensional Ultraperformance Liquid Chromatography with Tandem Mass Spectrometry: Possible Clinical Implication.

Authors:  Daniel Gackowski; Marta Starczak; Ewelina Zarakowska; Martyna Modrzejewska; Anna Szpila; Zbigniew Banaszkiewicz; Ryszard Olinski
Journal:  Anal Chem       Date:  2016-12-08       Impact factor: 6.986

2.  Tumor development is associated with decrease of TET gene expression and 5-methylcytosine hydroxylation.

Authors:  H Yang; Y Liu; F Bai; J-Y Zhang; S-H Ma; J Liu; Z-D Xu; H-G Zhu; Z-Q Ling; D Ye; K-L Guan; Y Xiong
Journal:  Oncogene       Date:  2012-03-05       Impact factor: 9.867

3.  Mutations along a TET2 active site scaffold stall oxidation at 5-hydroxymethylcytosine.

Authors:  Monica Yun Liu; Hedieh Torabifard; Daniel J Crawford; Jamie E DeNizio; Xing-Jun Cao; Benjamin A Garcia; G Andrés Cisneros; Rahul M Kohli
Journal:  Nat Chem Biol       Date:  2016-12-05       Impact factor: 15.040

4.  Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.

Authors:  Mamta Tahiliani; Kian Peng Koh; Yinghua Shen; William A Pastor; Hozefa Bandukwala; Yevgeny Brudno; Suneet Agarwal; Lakshminarayan M Iyer; David R Liu; L Aravind; Anjana Rao
Journal:  Science       Date:  2009-04-16       Impact factor: 47.728

5.  Loss of heterozygosity 4q24 and TET2 mutations associated with myelodysplastic/myeloproliferative neoplasms.

Authors:  Anna M Jankowska; Hadrian Szpurka; Ramon V Tiu; Hideki Makishima; Manuel Afable; Jungwon Huh; Christine L O'Keefe; Rebecca Ganetzky; Michael A McDevitt; Jaroslaw P Maciejewski
Journal:  Blood       Date:  2009-04-16       Impact factor: 22.113

6.  Mutation in TET2 in myeloid cancers.

Authors:  François Delhommeau; Sabrina Dupont; Véronique Della Valle; Chloé James; Severine Trannoy; Aline Massé; Olivier Kosmider; Jean-Pierre Le Couedic; Fabienne Robert; Antonio Alberdi; Yann Lécluse; Isabelle Plo; François J Dreyfus; Christophe Marzac; Nicole Casadevall; Catherine Lacombe; Serge P Romana; Philippe Dessen; Jean Soulier; Franck Viguié; Michaela Fontenay; William Vainchenker; Olivier A Bernard
Journal:  N Engl J Med       Date:  2009-05-28       Impact factor: 91.245

7.  Structural insight into substrate preference for TET-mediated oxidation.

Authors:  Lulu Hu; Junyan Lu; Jingdong Cheng; Qinhui Rao; Ze Li; Haifeng Hou; Zhiyong Lou; Lei Zhang; Wei Li; Wei Gong; Mengjie Liu; Chang Sun; Xiaotong Yin; Jie Li; Xiangshi Tan; Pengcheng Wang; Yinsheng Wang; Dong Fang; Qiang Cui; Pengyuan Yang; Chuan He; Hualiang Jiang; Cheng Luo; Yanhui Xu
Journal:  Nature       Date:  2015-10-28       Impact factor: 49.962

8.  Consequences of mutant TET2 on clonality and subclonal hierarchy.

Authors:  Cassandra M Hirsch; Aziz Nazha; Kassy Kneen; Mohamed E Abazeed; Manja Meggendorfer; Bartlomiej P Przychodzen; Niroshan Nadarajah; Vera Adema; Yasunobu Nagata; Abhinav Goyal; Hassan Awada; Mohammad Fahad Asad; Valeria Visconte; Yihong Guan; Mikkael A Sekeres; Ryszard Olinski; Babal Kant Jha; Thomas LaFramboise; Tomas Radivoyevitch; Torsten Haferlach; Jaroslaw P Maciejewski
Journal:  Leukemia       Date:  2018-05-24       Impact factor: 12.883

9.  In vivo genome-wide profiling reveals a tissue-specific role for 5-formylcytosine.

Authors:  Mario Iurlaro; Gordon R McInroy; Heather E Burgess; Wendy Dean; Eun-Ang Raiber; Martin Bachman; Dario Beraldi; Shankar Balasubramanian; Wolf Reik
Journal:  Genome Biol       Date:  2016-06-29       Impact factor: 13.583

10.  5-Formylcytosine organizes nucleosomes and forms Schiff base interactions with histones in mouse embryonic stem cells.

Authors:  Eun-Ang Raiber; Guillem Portella; Sergio Martínez Cuesta; Robyn Hardisty; Pierre Murat; Zhe Li; Mario Iurlaro; Wendy Dean; Julia Spindel; Dario Beraldi; Zheng Liu; Mark A Dawson; Wolf Reik; Shankar Balasubramanian
Journal:  Nat Chem       Date:  2018-10-22       Impact factor: 24.427
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  1 in total

Review 1.  Genomic Uracil and Aberrant Profile of Demethylation Intermediates in Epigenetics and Hematologic Malignancies.

Authors:  Ryszard Olinski; Geir Slupphaug; Marek Foksinski; Hans Einar Krokan
Journal:  Int J Mol Sci       Date:  2021-04-19       Impact factor: 5.923
  1 in total

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