Literature DB >> 31486667

Long Noncoding Transcriptome in Chronic Obstructive Pulmonary Disease.

Dinesh Devadoss1, Christopher Long1, Raymond J Langley2, Marko Manevski1, Madhavan Nair1, Michael A Campos3,4, Glen Borchert2, Irfan Rahman5, Hitendra S Chand1.   

Abstract

Chronic airway inflammation from recurring exposures to noxious environmental stimuli results in a progressive and irreversible airflow limitation and the lung parenchymal damage that characterizes chronic obstructive pulmonary disease (COPD). The large variability observed in the onset and progression of COPD is primarily driven by complex gene-environment interactions. The transcriptomic and epigenetic memory potential of lung epithelial and innate immune cells drive responses, such as mucus hyperreactivity and airway remodeling, that are tightly regulated by various molecular mechanisms, for which several candidate susceptibility genes have been described. However, the recently described noncoding RNA species, in particular the long noncoding RNAs, may also have an important role in modulating pulmonary responses to chronic inhalation of toxic substances and the development of COPD. This review outlines the features of long noncoding RNAs that have been implicated in regulating the airway inflammatory responses to cigarette smoke exposure and their possible association with COPD pathogenesis. As COPD continues to debilitate the increasingly aging population and contribute to higher morbidity and mortality rates worldwide, the search for better biomarkers and alternative therapeutic options is pivotal.

Entities:  

Keywords:  cigarette smoke; inflammation; lncRNAs; mitochondria; senescence

Mesh:

Substances:

Year:  2019        PMID: 31486667      PMCID: PMC6890411          DOI: 10.1165/rcmb.2019-0184TR

Source DB:  PubMed          Journal:  Am J Respir Cell Mol Biol        ISSN: 1044-1549            Impact factor:   6.914


  83 in total

1.  Structural and physiological age-associated changes in aging lungs.

Authors:  Martin R Miller
Journal:  Semin Respir Crit Care Med       Date:  2010-10-12       Impact factor: 3.119

Review 2.  The effects of mitochondria-associated long noncoding RNAs in cancer mitochondria: New players in an old arena.

Authors:  Yijing Zhao; Lemeng Sun; Rachel R Wang; Ji-Fan Hu; Jiuwei Cui
Journal:  Crit Rev Oncol Hematol       Date:  2018-08-27       Impact factor: 6.312

3.  Gender differences in COPD: are women more susceptible to smoking effects than men?

Authors:  Inga-Cecilie Sørheim; Ane Johannessen; Amund Gulsvik; Per S Bakke; Edwin K Silverman; Dawn L DeMeo
Journal:  Thorax       Date:  2010-06       Impact factor: 9.139

Review 4.  How long noncoding RNAs enforce their will on mitochondrial activity: regulation of mitochondrial respiration, reactive oxygen species production, apoptosis, and metabolic reprogramming in cancer.

Authors:  Boel De Paepe; Steve Lefever; Pieter Mestdagh
Journal:  Curr Genet       Date:  2017-09-06       Impact factor: 3.886

5.  Cellular and molecular characterization of ozone-induced pulmonary inflammation in the Cynomolgus monkey.

Authors:  Alexandra Hicks; Galina Kourteva; Holly Hilton; Hongli Li; Tai-An Lin; Will Liao; Ying Li; Xin Wei; Thomas March; Janet Benson; Louis M Renzetti
Journal:  Inflammation       Date:  2010-06       Impact factor: 4.092

Review 6.  Trained immunity: A program of innate immune memory in health and disease.

Authors:  Mihai G Netea; Leo A B Joosten; Eicke Latz; Kingston H G Mills; Gioacchino Natoli; Hendrik G Stunnenberg; Luke A J O'Neill; Ramnik J Xavier
Journal:  Science       Date:  2016-04-21       Impact factor: 47.728

7.  lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs.

Authors:  Xiu Cheng Quek; Daniel W Thomson; Jesper L V Maag; Nenad Bartonicek; Bethany Signal; Michael B Clark; Brian S Gloss; Marcel E Dinger
Journal:  Nucleic Acids Res       Date:  2014-10-20       Impact factor: 16.971

8.  lncRNome: a comprehensive knowledgebase of human long noncoding RNAs.

Authors:  Deeksha Bhartiya; Koustav Pal; Sourav Ghosh; Shruti Kapoor; Saakshi Jalali; Bharat Panwar; Sakshi Jain; Satish Sati; Shantanu Sengupta; Chetana Sachidanandan; Gajendra Pal Singh Raghava; Sridhar Sivasubbu; Vinod Scaria
Journal:  Database (Oxford)       Date:  2013-07-11       Impact factor: 3.451

9.  Microarray analysis of lung long non-coding RNAs in cigarette smoke-exposed mouse model.

Authors:  Hao Wang; Lei Chen; Diandian Li; Ni Zeng; Yanqiu Wu; Tao Wang; Yongchun Shen; Dan Xu; Fuqiang Wen
Journal:  Oncotarget       Date:  2017-12-18

10.  RNA sequencing identifies novel non-coding RNA and exon-specific effects associated with cigarette smoking.

Authors:  Margaret M Parker; Robert P Chase; Andrew Lamb; Alejandro Reyes; Aabida Saferali; Jeong H Yun; Blanca E Himes; Edwin K Silverman; Craig P Hersh; Peter J Castaldi
Journal:  BMC Med Genomics       Date:  2017-10-06       Impact factor: 3.063

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  17 in total

1.  LncRNA LOC729178 acts as a sponge of miR-144-3p to mitigate cigarette smoke extract-induced inflammatory injury via regulating PHLPP2 in 16HBE cells.

Authors:  Meihong Wang; Yufang Liu; Yufen Zhang; Luchang Zhang
Journal:  J Mol Histol       Date:  2021-04-13       Impact factor: 2.611

2.  Lnc-IL7R alleviates PM2.5-mediated cellular senescence and apoptosis through EZH2 recruitment in chronic obstructive pulmonary disease.

Authors:  Kang-Yun Lee; Shu-Chuan Ho; Wei-Lun Sun; Po-Hao Feng; Cheng-Wei Lin; Kuan-Yuan Chen; Hsiao-Chi Chuang; Chien-Hua Tseng; Tzu-Tao Chen; Sheng-Ming Wu
Journal:  Cell Biol Toxicol       Date:  2022-03-18       Impact factor: 6.691

3.  Immunomodulatory LncRNA on antisense strand of ICAM-1 augments SARS-CoV-2 infection-associated airway mucoinflammatory phenotype.

Authors:  Dinesh Devadoss; Arpan Acharya; Marko Manevski; Dominika Houserova; Michael D Cioffi; Kabita Pandey; Madhavan Nair; Prem Chapagain; Mehdi Mirsaeidi; Glen M Borchert; Siddappa N Byrareddy; Hitendra S Chand
Journal:  iScience       Date:  2022-06-30

4.  Increased Expression of LASI lncRNA Regulates the Cigarette Smoke and COPD Associated Airway Inflammation and Mucous Cell Hyperplasia.

Authors:  Marko Manevski; Dinesh Devadoss; Christopher Long; Shashi P Singh; Mohd Wasim Nasser; Glen M Borchert; Madhavan N Nair; Irfan Rahman; Mohan Sopori; Hitendra S Chand
Journal:  Front Immunol       Date:  2022-06-14       Impact factor: 8.786

5.  Update in Chronic Obstructive Pulmonary Disease 2020.

Authors:  Andy I Ritchie; Jonathon R Baker; Trisha M Parekh; James P Allinson; Surya P Bhatt; Louise E Donnelly; Gavin C Donaldson
Journal:  Am J Respir Crit Care Med       Date:  2021-07-01       Impact factor: 21.405

6.  Distinct type 2-high inflammation associated molecular signatures of chronic rhinosinusitis with nasal polyps with comorbid asthma.

Authors:  Luo Zhang; Chengshuo Wang; Ming Wang; Xiangting Bu; Ge Luan; Liqing Lin; Yang Wang; Jianmin Jin
Journal:  Clin Transl Allergy       Date:  2020-07-03       Impact factor: 5.871

7.  Expression of lncRNA MEG3 in asthma with different phenotypes and its relationship with course of disease.

Authors:  Yan Feng; Chang Yang; Wen Yan
Journal:  Exp Ther Med       Date:  2020-01-03       Impact factor: 2.447

8.  Silencing of lncRNA MIAT alleviates LPS-induced pneumonia via regulating miR-147a/NKAP/NF-κB axis.

Authors:  Min Liu; Weixin Li; Fuxing Song; Ling Zhang; Xianjun Sun
Journal:  Aging (Albany NY)       Date:  2020-12-09       Impact factor: 5.682

9.  Differential plasma exosomal long non-coding RNAs expression profiles and their emerging role in E-cigarette users, cigarette, waterpipe, and dual smokers.

Authors:  Gagandeep Kaur; Kameshwar Singh; Krishna P Maremanda; Dongmei Li; Hitendra S Chand; Irfan Rahman
Journal:  PLoS One       Date:  2020-12-08       Impact factor: 3.240

10.  Expression of long non-coding RNA LUCAT1 in patients with chronic obstructive pulmonary disease and its potential functions in regulating cigarette smoke extract-induced 16HBE cell proliferation and apoptosis.

Authors:  Shan Zhao; Chunyan Lin; Tao Yang; Xiaoyu Qian; Junjie Lu; Jing Cheng
Journal:  J Clin Lab Anal       Date:  2021-06-14       Impact factor: 2.352

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