Literature DB >> 31484146

Learning Graph Embedding With Adversarial Training Methods.

Shirui Pan, Ruiqi Hu, Sai-Fu Fung, Guodong Long, Jing Jiang, Chengqi Zhang.   

Abstract

Graph embedding aims to transfer a graph into vectors to facilitate subsequent graph-analytics tasks like link prediction and graph clustering. Most approaches on graph embedding focus on preserving the graph structure or minimizing the reconstruction errors for graph data. They have mostly overlooked the embedding distribution of the latent codes, which unfortunately may lead to inferior representation in many cases. In this article, we present a novel adversarially regularized framework for graph embedding. By employing the graph convolutional network as an encoder, our framework embeds the topological information and node content into a vector representation, from which a graph decoder is further built to reconstruct the input graph. The adversarial training principle is applied to enforce our latent codes to match a prior Gaussian or uniform distribution. Based on this framework, we derive two variants of the adversarial models, the adversarially regularized graph autoencoder (ARGA) and its variational version, and adversarially regularized variational graph autoencoder (ARVGA), to learn the graph embedding effectively. We also exploit other potential variations of ARGA and ARVGA to get a deeper understanding of our designs. Experimental results that compared 12 algorithms for link prediction and 20 algorithms for graph clustering validate our solutions.

Year:  2019        PMID: 31484146     DOI: 10.1109/TCYB.2019.2932096

Source DB:  PubMed          Journal:  IEEE Trans Cybern        ISSN: 2168-2267            Impact factor:   11.448


  3 in total

1.  De novo reconstruction of cell interaction landscapes from single-cell spatial transcriptome data with DeepLinc.

Authors:  Runze Li; Xuerui Yang
Journal:  Genome Biol       Date:  2022-06-03       Impact factor: 17.906

2.  Graph Convolutional Network and Convolutional Neural Network Based Method for Predicting lncRNA-Disease Associations.

Authors:  Ping Xuan; Shuxiang Pan; Tiangang Zhang; Yong Liu; Hao Sun
Journal:  Cells       Date:  2019-08-30       Impact factor: 6.600

3.  Survey on graph embeddings and their applications to machine learning problems on graphs.

Authors:  Ilya Makarov; Dmitrii Kiselev; Nikita Nikitinsky; Lovro Subelj
Journal:  PeerJ Comput Sci       Date:  2021-02-04
  3 in total

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