Literature DB >> 31483566

Development of a novel quantitative real-time PCR assay with lyophilized powder reagent to detect African swine fever virus in blood samples of domestic pigs in China.

Aiping Wang1, Rui Jia1, Yunchao Liu2, Jingming Zhou1, Yuanming Qi1, Yumei Chen1, Dongmin Liu2, Jianguo Zhao2, Haining Shi2, Jing Zhang1, Gaiping Zhang1.   

Abstract

African swine fever (ASF) is a devastating disease, which is causing huge economic losses in China. Therefore, it is urgent to provide a rapid, highly specific and sensitive diagnostic method for the detection of African swine fever virus (ASFV), the ASF infectious agent. In this study, a novel quantitative real-time polymerase chain reaction (qPCR) assay with lyophilized powder reagents (LPR), targeting the major structural protein p72 gene, was established for the detection of ASFV. This assay had many advantages, such as saving time and money, good sensitivity and repeatability. The sensitivity of this assay was 100 copies/μl of ASFV plasmid templates, and the assay showed 10-fold greater sensitivity than a qPCR assay recommended by OIE. Furthermore, specificity analysis showed that qPCR with LPR for ASFV had no cross-reactivity with other important swine pathogens. In clinical diagnoses of 218 blood samples of domestic pigs in China, the positive rate of the diagnosis of ASFV by qPCR with the LPR and commercial kit reached 80.73% (176/218) and 76.61% (167/218) respectively. The coincidence rate between the two assays is 92.20% (201/218), and kappa value is 0.768 (p < .0001) by SPSS analysis. The overall agreement between the two assays was 95.87% (209/218). Further Pearson correlation and linear regression analysis showed a significant correlation between the two assays with an R2 value of 0.9438. The entire procedure, from specimen processing to result reporting, can be completed within 2 hr. Our results demonstrated that the qPCR-LPR assay is a good laboratory diagnostic tool for sensitive and efficient detection of ASFV.
© 2019 Blackwell Verlag GmbH.

Entities:  

Keywords:  African swine fever virus; laboratory diagnosis; lyophilized powder reagent; real-time PCR

Mesh:

Substances:

Year:  2019        PMID: 31483566     DOI: 10.1111/tbed.13350

Source DB:  PubMed          Journal:  Transbound Emerg Dis        ISSN: 1865-1674            Impact factor:   5.005


  14 in total

1.  HRP-conjugated-nanobody-based cELISA for rapid and sensitive clinical detection of ASFV antibodies.

Authors:  Huijun Zhao; Jiahui Ren; Shuya Wu; Haoran Guo; Yongkun Du; Bo Wan; Pengchao Ji; Yanan Wu; Guoqing Zhuang; Angke Zhang; Gaiping Zhang
Journal:  Appl Microbiol Biotechnol       Date:  2022-05-25       Impact factor: 5.560

2.  Development of A Super-Sensitive Diagnostic Method for African Swine Fever Using CRISPR Techniques.

Authors:  Meishen Ren; Hong Mei; Ming Zhou; Zhen F Fu; Heyou Han; Dingren Bi; Fuhu Peng; Ling Zhao
Journal:  Virol Sin       Date:  2021-01-07       Impact factor: 4.327

3.  Swift and Reliable "Easy Lab" Methods for the Sensitive Molecular Detection of African Swine Fever Virus.

Authors:  Ahmed Elnagar; Jutta Pikalo; Martin Beer; Sandra Blome; Bernd Hoffmann
Journal:  Int J Mol Sci       Date:  2021-02-25       Impact factor: 5.923

4.  Development of an Indirect ELISA to Detect African Swine Fever Virus pp62 Protein-Specific Antibodies.

Authors:  Kexin Zhong; Mengmeng Zhu; Qichao Yuan; Zhibang Deng; Simeng Feng; Daoxin Liu; Xiaomin Yuan
Journal:  Front Vet Sci       Date:  2022-01-13

5.  Rapid Detection of Genotype II African Swine Fever Virus Using CRISPR Cas13a-Based Lateral Flow Strip.

Authors:  Ning Wei; Bohan Zheng; Junjun Niu; Tao Chen; Jing Ye; Youhui Si; Shengbo Cao
Journal:  Viruses       Date:  2022-01-18       Impact factor: 5.048

6.  Development of an Accurate and Sensitive Diagnostic System Based on Conventional PCR for Detection of African Swine Fever Virus in Food Waste.

Authors:  Siwon Lee; Junhwa Kwon; Bo-Young Kim; Jin-Ho Kim
Journal:  Indian J Microbiol       Date:  2022-03-18       Impact factor: 2.461

7.  Development and clinical application of a novel CRISPR-Cas12a based assay for the detection of African swine fever virus.

Authors:  Xiaoying Wang; Sheng He; Na Zhao; Xiaohong Liu; Yongchang Cao; Guihong Zhang; Gang Wang; Chunhe Guo
Journal:  BMC Microbiol       Date:  2020-09-14       Impact factor: 3.605

8.  Multiplex and visual detection of African Swine Fever Virus (ASFV) based on Hive-Chip and direct loop-mediated isothermal amplification.

Authors:  Yuan-Shou Zhu; Ning Shao; Jian-Wei Chen; Wen-Bao Qi; Yang Li; Peng Liu; Yan-Jing Chen; Su-Ying Bian; Yan Zhang; Sheng-Ce Tao
Journal:  Anal Chim Acta       Date:  2020-10-08       Impact factor: 6.558

Review 9.  African Swine Fever in Wild Boar in Europe-A Review.

Authors:  Carola Sauter-Louis; Franz J Conraths; Carolina Probst; Ulrike Blohm; Katja Schulz; Julia Sehl; Melina Fischer; Jan Hendrik Forth; Laura Zani; Klaus Depner; Thomas C Mettenleiter; Martin Beer; Sandra Blome
Journal:  Viruses       Date:  2021-08-30       Impact factor: 5.048

10.  Development of a novel real-time PCR assay targeting p54 gene for rapid detection of African swine fever virus (ASFV) strains circulating in Vietnam.

Authors:  Thi Bich Ngoc Trinh; Thang Truong; Van Tam Nguyen; Xuan Dang Vu; Le Anh Dao; Thi Lan Nguyen; Aruna Ambagala; Shawn Babiuk; Jinsik Oh; Daesub Song; Van Phan Le
Journal:  Vet Med Sci       Date:  2021-08-13
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