| Literature DB >> 31483073 |
Richard J Mandle1, John W Goodby1.
Abstract
The NTB phase phases possess a local helical structure with a pitch length of a few nanometers and is typically exhibited by materials consisting of two rigid mesogenic units linked by a flexible oligomethylene spacer of odd parity, giving a bent shape. We report the synthesis and characterisation of two novel dimeric liquid crystals, and perform a computational study on 10 cyanobiphenyl dimers with varying linking groups, generating a large library of conformers for each compound; this allows us to present molecular bend angles as probability weighted averages of many conformers, rather than use a single conformer. We validate conformer libraries by comparison of interproton distances with those obtained from solution-based 1D 1 H NOESY NMR, finding good agreement between experiment and computational work. Conversely, we find that using any single conformer fails to reproduce experimental interproton distances. We find the use of a single conformer significantly overestimates the molecular bend angle while also ignoring flexibility; in addition, we show that the average bend angle and flexibility are both linked to the relative stability of the NTB phase.Entities:
Keywords: NMR spectroscopy; conformer libraries; liquid crystals; soft matter
Year: 2019 PMID: 31483073 PMCID: PMC6899767 DOI: 10.1002/chem.201903677
Source DB: PubMed Journal: Chemistry ISSN: 0947-6539 Impact factor: 5.236
Figure 1Plot of energy as a function of dihedral angle for propoxybenzene (blue, left), phenyl(propyl)sulfane (red, centre), and phenyl(propyl)selane (black, right), calculated by performing fully relaxed scans using the wB97XD hybrid functional30 and the aug‐cc‐pVTZ basis set.31 Solid lines are spline fits to the computational data, and are presented as a guide to the eye.
Scheme 1Transition temperatures and molecular structures of 10 dimeric compounds with 4‐cyanobiphenyl mesogenic units and a spacer containing a long linear sequence of nine non‐hydrogen atoms, that is, methylene or equivalent.[a]
|
| |||||||
|---|---|---|---|---|---|---|---|
|
No. |
L1 |
|
L2 |
|
|
|
δ |
|
1 |
|
5 |
|
83.3 |
105.4 |
121.5 |
0.96 |
|
2 |
|
5 |
|
140.8 |
114.7 |
138.7 |
0.94 |
|
3 |
|
5 |
|
127.8 |
128.1 |
153.9 |
0.94 |
|
4 |
|
5 |
|
137.1 |
102.0 |
153.6 |
0.88 |
|
5 |
|
5 |
|
110.6 |
109.9 |
153.3 |
0.90 |
|
6 |
|
5 |
|
15.9[b] |
88.3 |
115.2 |
0.93 |
|
7 |
|
5 |
|
55.0 |
95.9 |
146.7 |
0.88 |
|
8 |
|
5 |
|
80.8–101.4 |
43.1 |
71.9 |
0.91 |
|
9 |
|
4 |
|
95.1 [24.8] |
39.8 [<0.1] |
91.3 [0.9] |
0.86 |
|
10 |
|
5 |
|
122.4 [12.4] |
71.3 [<0.1] |
129.9 [0.5] |
0.85 |
[a] Transition temperatures [°C] of compounds 1–5 obtained from DSC at a heat/cool rate of 10 ° min−1.24 Values for 6 and 7 were taken from ref. 27, values for 8 were taken from ref. 28. Compounds 9 and 10 were studied as part of this work; transition temperatures and associated enthalpies were obtained from DSC at a heat/cool rate of 10° min−1. The scaled transition temperature (δT) is defined here as T NT−N/T N−Iso. [b] Glass to NTB transition, * CB=4‐cyanobiphenyl. Associated enthalpies of transition (kJ mol−1) are given in square parenthesis for novel compounds (9 and 10).
Figure 2(a) Molecular structure of compound 2, with proton environments used in NOE distance measurements labelled. (b) Overlaid image of all populated conformers (ΔE ≤20 kJ mol−1 at 298 K) of compound 2 obtained as described in the text. (c) Histogram plot of calculated bend angle probabilities of compound 2, with a single Gaussian fit to the major peak at ≈110°. (d) Plot of Interproton distances (H−H) obtained from calculations versus those from 1H NOE NMR: red squares show calculated interproton distances from a single conformer (the all trans global minimum) whereas blue circles show interproton distances which are a probability weighted average of many conformations.
Interproton distances obtained by taking a probability weighted average from each conformer.[a]
|
|
|
|
|
|
|
|---|---|---|---|---|---|
|
|
– |
3.0 (3.0) |
4.7 (4.7) |
5.1 (5.5) |
4.9 (5.3) |
|
|
3.0 (3.0) |
– |
2.9 (3.2) |
3.7 (3.6) |
3.9 (4.1) |
|
|
4.7 (4.7) |
2.9 (3.2) |
– |
2.7 (2.6) |
2.7 (2.7) |
|
|
5.1 (5.5) |
3.7 (3.6) |
2.7 (2.6) |
– |
2.7 (2.7) |
|
|
4.9 (5.3) |
3.9 (4.1) |
2.7 (2.7) |
2.9 (2.7) |
– |
[a] Interproton distances [Å] of compound 2 as measured from 1D NOE NMR intensities (500 MHz, CDCl3) and, in parenthesis, interproton distances as a probability weighted average of many conformers.
Average bend angles, bend angles of the global energy minimum conformer, FWHM values, and scaled transition temperatures of compounds 1–10.[a]
|
No. |
δ |
|
|
|
|---|---|---|---|---|
|
|
0.96 |
111.9 |
103.1 |
16.9 |
|
|
0.94 |
125.1 |
111.5 |
9.4 |
|
|
0.94 |
108.5 |
98.5 |
40.8 |
|
|
0.88 |
126.7 |
98.5 |
35.9 |
|
|
0.90 |
118.2 |
100.7 |
30.0 |
|
|
0.93 |
120.2 |
99.2 |
22.0 |
|
|
0.88 |
130.2 |
96.8 |
37.4 |
|
|
0.91 |
114.3 |
98.8 |
41.2 |
|
|
0.86 |
109.6 |
93.0 |
50.1 |
|
|
0.85 |
131.6 |
96.8 |
49.5 |
[a] Scaled transition temperatures (δT, T NTB−N/T N−Iso), bending angle for the global energy minimum conformer ( ), probability weighted average bending angle ( ), full‐width at half maximum ( ) determined as described in the text.
Figure 3Plots of the scaled transition temperature (δT, T NTB−N/T N−Iso) as a function of the FWHM (a, Y–Z plane of Figure 3c) and as a function of the average bend angle (b, X–Z plane of Figure 3c) for 1–10. (c) Plot of the scaled transition temperature (δT,T NTB−N/T N−Iso) versus FWHM [°] versus average bend angle [°]. The dashed line is a line of best fit to the data and is presented as a guide to the eye. The size of each data point is inversely proportional to the FWHM, and are coloured according to the T NTB−N/T N−Iso as shown by the scale bar on the right.