Literature DB >> 31477930

A reference genome for pea provides insight into legume genome evolution.

Jonathan Kreplak1, Mohammed-Amin Madoui2, Petr Cápal3, Petr Novák4, Karine Labadie5, Grégoire Aubert1, Philipp E Bayer6, Krishna K Gali7, Robert A Syme8, Dorrie Main9, Anthony Klein1, Aurélie Bérard10, Iva Vrbová4, Cyril Fournier1, Leo d'Agata5, Caroline Belser5, Wahiba Berrabah5, Helena Toegelová3, Zbyněk Milec3, Jan Vrána3, HueyTyng Lee6,11, Ayité Kougbeadjo1, Morgane Térézol1, Cécile Huneau12, Chala J Turo13, Nacer Mohellibi14, Pavel Neumann4, Matthieu Falque15, Karine Gallardo1, Rebecca McGee16, Bunyamin Tar'an7, Abdelhafid Bendahmane17, Jean-Marc Aury5, Jacqueline Batley6, Marie-Christine Le Paslier10, Noel Ellis18, Thomas D Warkentin7, Clarice J Coyne16, Jérome Salse12, David Edwards6, Judith Lichtenzveig19, Jiří Macas4, Jaroslav Doležel3, Patrick Wincker2, Judith Burstin20.   

Abstract

We report the first annotated chromosome-level reference genome assembly for pea, Gregor Mendel's original genetic model. Phylogenetics and paleogenomics show genomic rearrangements across legumes and suggest a major role for repetitive elements in pea genome evolution. Compared to other sequenced Leguminosae genomes, the pea genome shows intense gene dynamics, most likely associated with genome size expansion when the Fabeae diverged from its sister tribes. During Pisum evolution, translocation and transposition differentially occurred across lineages. This reference sequence will accelerate our understanding of the molecular basis of agronomically important traits and support crop improvement.

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Year:  2019        PMID: 31477930     DOI: 10.1038/s41588-019-0480-1

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  71 in total

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Review 4.  Review of the health benefits of peas (Pisum sativum L.).

Authors:  Wendy J Dahl; Lauren M Foster; Robert T Tyler
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Review 5.  Carbohydrate fractions of legumes: uses in human nutrition and potential for health.

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Journal:  Br J Nutr       Date:  2002-12       Impact factor: 3.718

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Journal:  DNA Res       Date:  2008-05-28       Impact factor: 4.458

Review 9.  Genomic Tools in Pea Breeding Programs: Status and Perspectives.

Authors:  Nadim Tayeh; Grégoire Aubert; Marie-Laure Pilet-Nayel; Isabelle Lejeune-Hénaut; Thomas D Warkentin; Judith Burstin
Journal:  Front Plant Sci       Date:  2015-11-27       Impact factor: 5.753

10.  In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae.

Authors:  Jiří Macas; Petr Novák; Jaume Pellicer; Jana Čížková; Andrea Koblížková; Pavel Neumann; Iva Fuková; Jaroslav Doležel; Laura J Kelly; Ilia J Leitch
Journal:  PLoS One       Date:  2015-11-25       Impact factor: 3.240

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  90 in total

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4.  Comparative cytogenomics reveals genome reshuffling and centromere repositioning in the legume tribe Phaseoleae.

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6.  A major-effect genetic locus, ApRVII, controlling resistance against both adapted and non-adapted aphid biotypes in pea.

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Review 8.  Advancing crop genomics from lab to field.

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