Literature DB >> 31477893

A proofreading-impaired herpesvirus generates populations with quasispecies-like structure.

Jakob Trimpert1, Nicole Groenke1, Dusan Kunec1, Kathrin Eschke1, Shulin He2,3, Dino P McMahon2,3, Nikolaus Osterrieder4.   

Abstract

RNA virus populations are composed of highly diverse individuals that form a cloud of related sequences commonly referred to as a 'quasispecies'1-3. This diversity arises as a consequence of low-fidelity genome replication4,5. By contrast, DNA virus populations contain more uniform individuals with similar fitness6. Genome diversity is often correlated with increased fitness in RNA viruses, while DNA viruses are thought to require more faithful genome replication. During DNA replication, erroneously incorporated bases are removed by a 3'-5' exonuclease, a highly conserved enzymatic function of replicative DNA but not RNA polymerases. This proofreading process enhances replication fidelity and ensures the genome integrity of DNA organisms, including large DNA viruses7. Here, we show that a herpesvirus can tolerate impaired exonucleolytic proofreading, resulting in DNA virus populations, which, as in RNA viruses8, are composed of highly diverse genotypes of variable individual fitness. This indicates that herpesvirus mutant diversity may compensate for individual fitness loss. Notably, in vivo infection with diverse virus populations results in a marked increase in virulence compared to genetically homogenous parental virus. While we cannot exclude that the increase in virulence is caused by selection of and/or interactions between individual genotypes, our findings are consistent with quasispecies dynamics. Our results contrast with traditional views of DNA virus replication and evolution, and indicate that a substantial increase in population diversity can lead to higher virulence.

Entities:  

Mesh:

Year:  2019        PMID: 31477893     DOI: 10.1038/s41564-019-0547-x

Source DB:  PubMed          Journal:  Nat Microbiol        ISSN: 2058-5276            Impact factor:   17.745


  48 in total

Review 1.  The distribution of rates of spontaneous mutation over viruses, prokaryotes, and eukaryotes.

Authors:  J W Drake
Journal:  Ann N Y Acad Sci       Date:  1999-05-18       Impact factor: 5.691

Review 2.  What Is a Quasispecies? Historical Origins and Current Scope.

Authors:  Esteban Domingo; Peter Schuster
Journal:  Curr Top Microbiol Immunol       Date:  2016       Impact factor: 4.291

Review 3.  Marek's disease virus: from miasma to model.

Authors:  Nikolaus Osterrieder; Jeremy P Kamil; Daniel Schumacher; B Karsten Tischer; Sascha Trapp
Journal:  Nat Rev Microbiol       Date:  2006-04       Impact factor: 60.633

Review 4.  Rethinking quasispecies theory: From fittest type to cooperative consortia.

Authors:  Luis P Villarreal; Guenther Witzany
Journal:  World J Biol Chem       Date:  2013-11-26

5.  Viral replication modes in single-peak fitness landscapes: A dynamical systems analysis.

Authors:  Joan Fornés; J Tomás Lázaro; Tomás Alarcón; Santiago F Elena; Josep Sardanyés
Journal:  J Theor Biol       Date:  2018-10-06       Impact factor: 2.691

Review 6.  Mechanisms and Concepts in RNA Virus Population Dynamics and Evolution.

Authors:  Patrick T Dolan; Zachary J Whitfield; Raul Andino
Journal:  Annu Rev Virol       Date:  2018-07-26       Impact factor: 10.431

Review 7.  Viral quasispecies.

Authors:  Raul Andino; Esteban Domingo
Journal:  Virology       Date:  2015-03-29       Impact factor: 3.616

Review 8.  Fidelity of DNA replication-a matter of proofreading.

Authors:  Anna Bębenek; Izabela Ziuzia-Graczyk
Journal:  Curr Genet       Date:  2018-03-02       Impact factor: 3.886

9.  A phylogenomic analysis of Marek's disease virus reveals independent paths to virulence in Eurasia and North America.

Authors:  Jakob Trimpert; Nicole Groenke; Maria Jenckel; Shulin He; Dusan Kunec; Moriah L Szpara; Stephen J Spatz; Nikolaus Osterrieder; Dino P McMahon
Journal:  Evol Appl       Date:  2017-09-03       Impact factor: 5.183

Review 10.  Fidelity Variants and RNA Quasispecies.

Authors:  Antonio V Bordería; Kathryn Rozen-Gagnon; Marco Vignuzzi
Journal:  Curr Top Microbiol Immunol       Date:  2016       Impact factor: 4.291

View more
  8 in total

1.  Ribozyme Mutagenic Evolution: Mechanisms of Survival.

Authors:  Carolina Diaz Arenas; Aleksandra Ardaševa; Jonathan Miller; Alexander S Mikheyev; Yohei Yokobayashi
Journal:  Orig Life Evol Biosph       Date:  2022-01-07       Impact factor: 1.950

2.  Host translesion polymerases are required for viral genome integrity.

Authors:  Sebastian Zeltzer; Pierce Longmire; Marek Svoboda; Giovanni Bosco; Felicia Goodrum
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-10       Impact factor: 12.779

3.  The Diverse Major Histocompatibility Complex Haplotypes of a Common Commercial Chicken Line and Their Effect on Marek's Disease Virus Pathogenesis and Tumorigenesis.

Authors:  Luca D Bertzbach; Clive A Tregaskes; Rebecca J Martin; Undine-Sophie Deumer; Lan Huynh; Ahmed M Kheimar; Andelé M Conradie; Jakob Trimpert; Jim Kaufman; Benedikt B Kaufer
Journal:  Front Immunol       Date:  2022-05-27       Impact factor: 8.786

4.  Marek's Disease Virus Requires Both Copies of the Inverted Repeat Regions for Efficient In Vivo Replication and Pathogenesis.

Authors:  Tereza Vychodil; Andelé M Conradie; Jakob Trimpert; Amr Aswad; Luca D Bertzbach; Benedikt B Kaufer
Journal:  J Virol       Date:  2021-01-13       Impact factor: 5.103

Review 5.  Latest Insights into Marek's Disease Virus Pathogenesis and Tumorigenesis.

Authors:  Luca D Bertzbach; Andelé M Conradie; Yu You; Benedikt B Kaufer
Journal:  Cancers (Basel)       Date:  2020-03-10       Impact factor: 6.639

6.  Visualization of Marek's Disease Virus Genomes in Living Cells during Lytic Replication and Latency.

Authors:  Tereza Vychodil; Darren J Wight; Mariana Nascimento; Fabian Jolmes; Thomas Korte; Andreas Herrmann; Benedikt B Kaufer
Journal:  Viruses       Date:  2022-01-29       Impact factor: 5.048

Review 7.  Alphaherpesvirus Genomics: Past, Present and Future.

Authors:  Chad V Kuny; Moriah L Szpara
Journal:  Curr Issues Mol Biol       Date:  2020-11-07       Impact factor: 2.081

8.  Polymerase Fidelity Contributes to Foot-and-Mouth Disease Virus Pathogenicity and Transmissibility In Vivo.

Authors:  Chen Li; Jiabao Shi; Haiwei Wang; Efraín E Rivera-Serrano; Decheng Yang; Guohui Zhou; Chao Sun; Craig E Cameron; Li Yu
Journal:  J Virol       Date:  2020-12-09       Impact factor: 5.103

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.